Cololabis saira (Pacific saury): 133460708
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Entry
133460708 CDS
T09849
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csai00535
]
133460708
Proteoglycans [BR:
csai00535
]
Extracellular matrix (ECM) proteoglycans
Others
133460708
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4959
VWA_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
133460708
NCBI-ProteinID:
XP_061597427
LinkDB
All DBs
Position
15:complement(34696652..34902198)
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AA seq
1862 aa
AA seq
DB search
MEFSVRLSLCLLGFALITFFPHAAQGQVSSPRRFRARVLSPTTLDVSWKEPKGAFESYKV
IYTTDPGGAQKVTELSKQETKLIINDFEANQEYNFQIIAVKGGQESKPLQGKFEAQRSAV
EITQPQRGQSSVVARENEISEAEEGFMCKTPAIADIVILVDGSWSIGRINFRLVRSFLEN
LVKAFSVEFEKTRIGLAQYSGDPRIEWHLNTHTTKDAVIDAVKNLPYKGGNTLTGLALTY
ILENSFKPESGSRSGVPKIGILITDGKSQDDVIPPAQSLKDAGIELFAIGVKNADENELK
DIASPPEETHVYNVADFSVMSDIVEGLTKTVCDRVDDLDKQIKAVGGAVGGGEPAPPPVS
VAPPSDLVTSDITARSFRVTWTHAPGQVEKYRVVYVPASGGKPEEKVVQGTENSVELNYL
SSLMEYQVAVFAIYRSSTSEALRGSATTLVLPTVNDLELFDITHSTMRVRWKTAVGASGY
MILYAPLTEGDPADEKEVKVADSVNEVELEGLIPDTEYTVTVYAMYGEEASDPMTSQQTT
LPLVPARNLRFSDVDHNSARISWDAASRLVKGYRIMYVKTNGVQTNEVDVGTVTNYLLKN
LTSLMEYTVGVFAIYNEGEAEAVTDSFTTTTVPDPLDLQSSDVSTTSFRVSWRHPASDVV
MYRLIWTPTDGGDSEEVMVNGKTNTYLITGLISDSEYEVLLAAIYANEAESDEVVLIENT
AERTTTVATTTTTAATPHYGVKNMKIDDETMFSLRVSWQAVDSRNVRHYRLNYISAKGDR
AEETRTVPTSQSSLVLQPLLSDTEYKVTITPVYPGGEGPATSQMGRTLPPSAPKNLRVSE
EWYNRFRISWDVPPSPTMGYRVVYQPLSGSGPALETFVGEDVNTMLIVNLLSGTEYSVKV
IASYTTGSSEALAGRAKTLYLGVTNLSTYQVRMTALCAQWTTHRHANAYRVVAQSLAGSQ
RQETKLNGGSSRHCFKNLKPNTEYRISVMALLQDGTEGPAVATTVKTLPVPTPAPTKPPT
TTPPATIPPAKEVCKAARADLVFLVDGSWSIGDENFLKIIRFLYSTVGALDRIGPDGTQV
AIAQFSDDARTEFKLNSYSNKERLLDAINGISYKGGNTKTGRAIQHVKENIFTKEGGMRR
GIPNVLVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFV
DDLDAFQKIEEKLVTFVCEAATATCPSIPMSGSTTPGFRMMELFGLVENRFNSISGVSMV
PGTFNAFPCFHLHSNALLAQPTKFIHPEGLPSDYTITLLFRLLADTPEEPFALWEILNKN
NEPLVGVILDNGGKTLTFFNNDYRGDFQTVTFEGPEIKKLFFGSFHKLHIAISKTSAKVF
IDCKMVTEKTINAAGNITTDGLEVLGRMVRSRENKDNSAPFQLQNFDIVCSTSWASRDKC
CELPGLRKEVDCPALPKACTCTQDSRGLPGPPGQPGGPGIRGARGDRGESGPVGAAGPVG
DTGVPGPQGPPGAQGPSGRSILGPPGGPGERGQKGEAGQQGTQGIPGRPGTQGREGGAGP
RGLPGKDGPPGRPGPAGSMGTPGAPGAPGNTGAQGKQGELGPPGVAGSKGAKGERGDLQS
TASVQAIARQICEQMIQTHMERYNSILNHVPSPPVSIRTVPGPPGEPGRQGTSGPQGEQG
PPGRPGFPGQNGQNGNPGERGQTGEKGEKGTQGVGVQGPRGPPGPPGSQGQGRPGNQGSS
GRPGNPGSTGRPGVPGPLGPPGPPGYCDQNSCVGYNVGVQLPQSVFQNYGEAEEEDPYRY
YQPNYPPPQPVSPDDPALARDDPEQRPPAEGYRSTRSIGGGEKTGLKRRLKREAKVLPGL
TN
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggagttctcagtccgcctgagtctctgcctgctgggctttgctctcatcaccttcttc
cctcatgcagcacaaggccaagtttcatcaccgcggaggtttcgtgcaagagtcctgagt
cccaccacgctggatgtgtcgtggaaagaaccaaagggagcgtttgaaagctacaaggtc
atttacaccaccgacccgggtggagcacagaaggtgactgagctatcgaagcaggaaaca
aagctgataatcaatgactttgaggctaatcaggaatacaacttccagatcattgcagtc
aaaggaggccaagagagcaaaccccttcagggcaaatttgaagctcagcgatcagctgtc
gaaataactcaaccccaaaggggacagagcagcgttgttgcacgggagaacgagatctca
gaagctgaagagggatttatgtgcaagactccagccatcgccgacatcgtgatcctggtg
gacggctcgtggagcatcgggcgcatcaacttcaggctggtccgcagcttcctggagaac
ctggtcaaggccttctctgtggagtttgaaaagaccaggattggactggctcagtacagt
ggagaccccaggatcgagtggcatctaaatactcacaccaccaaagacgctgtgatagat
gccgtgaaaaacctgccgtataaagggggaaacacactgacaggtctggctctgacctac
atcctggaaaacagctttaaaccagagtcggggtccaggtccggagttcctaaaataggg
attctaatcactgacgggaaatcccaggacgatgtgatcccccccgcgcagagcctgaag
gatgctgggatagagctgttcgccatcggagttaaaaatgctgatgagaacgagctgaag
gacatcgcctcccctcccgaggaaacccacgtctacaacgtggccgacttcagtgtgatg
agcgacatcgtggaagggctcaccaagactgtttgtgaccgcgtggacgacctggacaag
cagatcaaagctgtagggggagctgtagggggaggcgagcctgcccctcctcccgtctcc
gtggccccccctagtgacctggtcacgtccgacataacggcccgcagcttccgtgtgacg
tggacccacgccccggggcaggtggagaagtaccgcgtggtctacgtccccgccagtgga
ggaaaaccagaagaaaaagtggtgcaggggacggagaacagcgtggagctgaactacctg
agctccctgatggagtaccaggtggccgtcttcgccatctaccgcagctccaccagcgag
gcgctgagaggaagcgccaccacgctggttctgcccacggtcaacgacctggagctgttt
gatatcactcacagcaccatgagggtccgctggaagacggccgtcggggcgtcggggtac
atgatcctgtacgccccgctgacggagggggaccctgcagatgagaaggaggtgaaggtg
gcagactcggtgaatgaggtggaactggagggactgattccagacacagagtacacggta
acagtttacgccatgtacggagaagaggccagtgaccccatgaccagccagcagaccaca
ttgcctctggtcccagccaggaacctgcgtttctcagacgtggaccacaactccgcccgg
atctcgtgggacgctgcctccaggttggtcaaaggctacagaatcatgtacgtcaagacc
aacggagtccagaccaacgaggtggatgttggtacggtgacaaactatttgttaaaaaac
ctgacgtcactgatggaatacacggttggggtgtttgctatctacaatgaaggggaagct
gaagccgtgaccgacagcttcacgacaactactgtcccagacccactggacctgcagagc
agcgacgtttccacaaccagcttcagggtgtcatggcgccacccggcctccgacgtggtg
atgtatcgactcatctggacaccgaccgacggaggagacagcgaggaggttatggtaaat
ggaaaaacaaacacttacctgataactggactgatctccgactcagagtacgaagttctc
ctcgccgccatctatgcaaacgaggctgagagtgacgaggtggtcctcatcgaaaacacc
gccgagagaacaacgaccgtcgccacaacaaccacaacagcagcaacccctcattacggc
gtgaagaatatgaagatcgatgatgaaaccatgttcagcttgcgggtgtcctggcaggcc
gtcgactccagaaatgtccgacactatcggctgaactacatcagtgcaaagggagacagg
gccgaggagacgaggacagtccccactagtcagagcagcctggtcctgcagcctcttctg
tcagacacagaatacaaagtgaccatcaccccggtgtatcctgggggagagggacccgca
acctcacaaatgggacggacacttcctccttcagcccctaaaaacctgcgggtttcagag
gaatggtacaaccgcttccggatcagctgggacgttcccccttcacccaccatggggtac
cgggtcgtgtaccagcctctctcaggctctggaccggcgctggaaacatttgtgggggag
gatgtgaacaccatgctgatcgtcaacctgctgagcgggacagagtacagcgtcaaggtc
atcgcctcctacaccaccggctccagcgaggccctggcagggagggcaaagaccttgtac
cttggggtgacgaacctgagcacgtaccaggtgaggatgacggcgttgtgcgcccagtgg
acgactcacagacacgccaacgcttacagggtggttgctcagtccctggccggaagtcaa
aggcaggagaccaagctgaatggaggatccagcagacactgtttcaaaaacctgaagccg
aacacagagtataggatcagcgtgatggctctgctgcaggacgggactgaagggcctgct
gtcgccacaactgtgaagacgttaccagtcccaacgccggcgccgaccaagcctcccacc
accaccccgccagccacaatcccgcctgccaaggaagtctgtaaagcagccagagcagat
ctggtgttcctggttgatggttcctggagtattggtgatgaaaacttcctgaagattatc
cgttttctgtacagcaccgttggagcgctggacaggatcggaccagatggcacgcaggta
gccattgctcagttcagtgacgacgcccgcaccgagttcaagctgaactcgtacagcaac
aaggagcgtctgctggatgccatcaacgggatctcgtacaagggaggaaacaccaagaca
ggtcgcgccatccagcatgtgaaggaaaacatcttcaccaaagagggcgggatgcgcagg
ggcatccccaacgtgctggtggtcctcacggacggccggtcccaggacgacgtcaacaaa
gtctccaaggaaatgcagatggaaggttacatcgtgtttgccatcggcttcgcggatgcc
gactacggggagctggtgagcatcgccagcaaacccagcgacagacacgtcttcttcgtg
gacgacctcgacgccttccagaagattgaagagaagctggtgacgtttgtgtgcgaggcg
gctactgccacttgtccgtctataccgatgagtggcagcacaactccaggtttccgtatg
atggagctgtttggtctcgttgagaatcgattcaacagcatctctggtgtttccatggtg
ccgggcaccttcaatgctttcccctgcttccacctccacagcaacgccctgctggcacag
ccaaccaagttcatccatccagaggggcttccttctgactacaccatcaccctgctgttc
agactgctggccgacacccccgaggagcccttcgccctctgggagatcctcaacaagaac
aacgagcccctggtcggcgtcatcctggacaatggaggaaaaactctgactttcttcaac
aacgactacagaggagatttccagacggtcaccttcgaagggccagagatcaaaaagctc
ttctttgggagcttccataagcttcatattgcaatcagtaagacgagcgctaaagtgttc
atcgactgcaaaatggtgacagagaaaaccatcaacgcagcaggaaacatcaccaccgac
ggactggaagttctgggcaggatggttcgctccagagaaaacaaggacaactctgcaccg
tttcagctgcagaactttgatattgtctgcagcacttcatgggccagcagagacaagtgc
tgtgaacttcctggtctgaggaaggaggtggactgtcccgccctgcccaaagcctgcacc
tgcacacaggacagccgaggcctccctggcccccccggacaaccaggcggccctggaatc
agaggagcccgaggcgaccgaggagagtcgggtccagtgggggcggccgggcctgttgga
gatacaggcgtaccaggacctcagggaccccccggggcacagggacccagcggccgctcc
atcctcggacccccgggcggtccaggggagcgggggcagaaaggtgaagcaggacagcaa
ggaactcagggaattcctggcagacctggaactcaaggcagggaagggggagcaggaccc
agagggcttccaggaaaagatggcccacctggccgaccgggccctgcaggatctatggga
acgccaggcgctccaggagctccaggaaataccggagctcaaggaaagcagggggaactg
ggacctccgggtgttgctggaagcaagggggccaaaggtgaacggggtgacctgcagtca
acagcgtcggttcaggccatcgccaggcagatctgcgagcagatgatacaaacccacatg
gaacgctacaactccattctcaaccacgtgcccagtccaccggtgtccatccgcacagta
ccgggacccccgggagagcctggtcgacagggaacctcgggaccccagggagaacagggg
ccaccaggaaggccgggcttcccaggacagaacggacagaatggaaacccaggagagaga
ggccaaacaggagaaaagggggagaaaggaactcaaggtgtcggtgtccaaggccccaga
ggacccccaggacctcctggttcccaaggacaaggcagaccaggaaaccagggttcatca
gggagacctgggaaccctggatctactggccgaccaggagttcctggtcccctcggcccc
ccaggacccccgggatactgcgaccagaactcctgcgtgggctacaacgttggggtccaa
ctgccgcagagcgtcttccaaaactacggcgaggccgaggaggaagacccgtaccgctac
taccaacccaactacccgccgccgcagccggtgtcgcccgacgacccggcgctggcgcgc
gacgaccccgagcagaggcctcccgctgaggggtaccgcagcacccggagcatagggggg
ggggagaaaactgggctgaagaggagactaaagagggaagcgaaggtgctgcctggacta
actaactga
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