Cololabis saira (Pacific saury): 133460734
Help
Entry
133460734 CDS
T09849
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03272
Virion - Hepatitis viruses
csai03273
Virion - Lassa virus and SFTS virus
csai04140
Autophagy - animal
csai04142
Lysosome
csai04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
133460734 (lamp1a)
03272 Virion - Hepatitis viruses
133460734 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133460734 (lamp1a)
04142 Lysosome
133460734 (lamp1a)
04140 Autophagy - animal
133460734 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133460734 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133460734 (lamp1a)
04090 CD molecules [BR:
csai04090
]
133460734 (lamp1a)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
133460734 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
133460734 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
133460734 (lamp1a)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
133460734 (lamp1a)
CD molecules [BR:
csai04090
]
Proteins
133460734 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
133460734
NCBI-ProteinID:
XP_061597459
LinkDB
All DBs
Position
2:25393870..25402034
Genome browser
AA seq
419 aa
AA seq
DB search
MMKVFQPSTALFIASWAVIGYIQAVTLEVKEGNSTCIKAELSALISITYSTSNSTGTGRV
SLPDSTSVNATRSSCGTDGGSPWLVAVFGFGHELGMSFSTNDRVYSVTNLTLQYNLSDSS
LFPEANSSDVVTVTSAAVGISAPINTTYRCQSPSTITLGGATVTFSDMRLEAYMPGNQLS
PTESLCVADQNSTTTPATPTTTMTTTTKPPAPAPPGTPEQGSYSVKDSNGTVCLLAKMGL
QLNVSYVPESQNKTVQELVNLTPNLTLSSGSCGTSSATLTLTQEQTTSLSFSFTMNSTSN
KYHLSGINLLANWSNMAVPFSANNTNLDYLRSTVGRSYMCNTEQTLVVAQSFSLNTFKLQ
VQPFGVTTNQFAAAEECQMDQDQMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagtctttcagccttcaaccgctctcttcatcgcctcgtgggcggttataggt
tacattcaagctgttaccctagaagtaaaagaggggaactctacctgcatcaaagctgag
ctgtctgcattgatctccatcacctacagcacatccaacagcacaggaacagggcgggta
tctctgcccgactccaccagcgtcaacgcaacaagaagctcatgcggtacagatggcggc
tcaccgtggctagtggcagttttcggatttggccatgaactcggaatgagcttctcaacg
aatgatagagtctacagtgtcactaacttgactctgcagtacaatctaagtgacagttca
ctcttccctgaggccaacagctctgatgtggtcactgtgacttctgctgcggttgggatc
tcagcaccgatcaacaccacctaccggtgtcagagcccttccaccatcacacttggtgga
gctacagtcactttctctgatatgaggctggaggcgtacatgccaggaaatcagctaagt
ccaacagagagtctatgtgtggcagatcaaaatagcacaacaactccagccacccctaca
actaccatgacaacaacaacaaaacctccagcaccagctccaccaggaactcctgaacag
ggttcctactcagtaaaggacagcaacggtactgtatgtctcttggcaaagatgggactg
cagctcaatgtctcctatgtgcccgagtctcagaacaagactgtccaagaactggtcaac
ctgactcccaatctgaccctttcatcaggatcatgtggaaccagcagcgccaccttaact
ttgacacaagagcaaaccacctctcttagcttctccttcactatgaactcaacatccaat
aagtaccacctaagtgggataaatctgctggctaactggtccaatatggctgttccattc
tcagccaataacaccaatcttgactatttacggagcacggtgggccgttcttacatgtgc
aacactgagcaaactctggttgtggcacaaagtttctctctcaacacattcaaacttcaa
gtccagccgtttggcgtcacaacaaaccagtttgctgcagctgaggagtgtcagatggac
caagaccaaatgttgatccccatcattgttggagcggcgcttgccggactcgtgctgatc
gtcctcattgcatatctaataggcaggaaaaggagccacgctggataccaaaccatttaa
DBGET
integrated database retrieval system
