Cololabis saira (Pacific saury): 133461021
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Entry
133461021 CDS
T09849
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133461021 (rnf115b)
04121 Ubiquitin system [BR:
csai04121
]
133461021 (rnf115b)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133461021 (rnf115b)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133461021 (rnf115b)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133461021 (rnf115b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
133461021
NCBI-ProteinID:
XP_061597757
LinkDB
All DBs
Position
15
Genome browser
AA seq
298 aa
AA seq
DB search
MAEAADLQQHRFFCHCCKCETSPKLPDLVCPRCDSGFIEEVPADSSLLQDTSASVANEDS
NSLFSELWQLLFMERSDLLSHPPSSDAYPDGSEQVSAGQSPPPPHTPTTPEAGEQESPPG
PEQEQERLSRPDQRPAVEGIVQGFLAGLFANNGNPGAAPATLSSMLQLYSNPGDYAWGQG
GLDSVITELLGQLENTGPPPAEKEMIASLPTVCISEEQTDCRLECPVCREEYSSGECVRK
LPCLHYFHSECIVPWLELHDTCPVCRKSLDGVDNSLAPTSEPLDVHTVRREQQEKQTI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggatttacagcaacatcgctttttctgtcattgctgtaaatgtgag
acgagtccgaaactcccggatctggtctgcccccgatgtgactctggcttcattgaggaa
gtaccagcagattccagcctcctccaggacacctcagcatcggttgccaacgaagattca
aactctttattctcagagttatggcagctgctattcatggagcgctctgacctgctgtcg
catccaccttcgtccgacgcttacccagatggcagcgagcaggtatctgcaggtcagagc
cctccccctccacacacacccacgactcctgaggccggagagcaggagtcgccccccggc
cccgaacaagaacaagagaggctgtccaggcccgaccagagacctgcagtggaagggatt
gttcaaggattcttggctggcctatttgccaataatggaaaccctggggcagccccagct
acactatccagcatgctacagctgtactcaaacccgggagattatgcgtggggtcaggga
ggtctggactcagtcatcacagagttgttaggacagttggagaatacgggtccacctcca
gcagaaaaggaaatgatcgcatccctgccaacagtttgcatctctgaagaacagacagac
tgccgtctagaatgtccagtttgtagggaggaatattcatcaggggagtgtgtcaggaag
ctcccctgcctccactacttccacagtgaatgtatagtgccttggttggagctgcatgat
acttgcccggtgtgtcgcaaaagtcttgatggggttgacaacagcctcgctccaacatca
gagcccctggacgtgcacacagtcaggcgggaacaacaggagaagcagacgatctga
DBGET
integrated database retrieval system
