Cololabis saira (Pacific saury): 133461161
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Entry
133461161 CDS
T09849
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133461161 (irx1b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133461161 (irx1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
133461161
NCBI-ProteinID:
XP_061597934
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All DBs
Position
15:20127267..20130978
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AA seq
456 aa
AA seq
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MSFPQLGYPQFLSAAQELYGGERPASAREDGAEGGVSSAAAAAAVGSVLGVYGSPWAAHN
YSAFLPYGGASDLALISQMTSQYELKDSPGSHPASLPVHAAAQGFYPYGQYPYGDPSRAK
TATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVT
WGRSAEDRDGRIFSSDNEDEHGKNGSDDEDEEEEIDLETVDIERPEEQRTGEQAEGEEGL
SVGEQASESQSSEKDSRTLPAEDLGRADTTGVSVSPGVKLAVDRSPGRQECQRPPQSKPK
IWSLAETATAPDSSHKASPAAYAHQAGLVSPGHPALLPAHGIYTCQIGKLHNWANAALLN
ANSLLNMRSFLGGAPAGHLPLQGALPAARHDARPAAGAGTSGTEDDSDVESSGSFSPKRD
DEGSHHRPESLKSPFQLITDRPHQGKAPQRVLTTTL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggtacccgcagttcctcagcgcggcccaggagctgtacggg
ggcgagcgcccggcgtccgcccgggaggacggcgcggagggcggcgtgagctccgcggcg
gccgcggcggccgtgggctcggttctcggggtgtacggcagcccgtgggcggcgcacaac
tacagcgccttcctgccgtacggcggagcctcggacctggcgctcatctcgcagatgacc
tcgcagtacgagttgaaggacagccccgggtcccacccggcctccctgcccgtccacgcc
gcggcgcagggcttctacccgtacggccagtacccgtacggggacccgtcccgggccaag
acggccaccagggagaccaccagcaccctgaaggcctggctgcaggagcaccagaagaac
ccctaccccaccaaaggagagaagatcatgctggccatcatcacgaggatgacactcaca
caggtgtctacctggttcgcaaacgcgcgcagacgcctgaagaaggagaacaaggtgacc
tggggccgcagcgccgaggaccgcgacggccgcatcttcagcagcgacaacgaggacgag
cacggcaagaacggcagcgacgacgaagacgaagaggaggagatcgatctggaaacggtc
gatatcgaaagacccgaggagcagaggacgggggagcaagcggagggagaggagggcctg
tctgtcggagagcaggcctcggagtcacagagctccgagaaagacagcaggacgcttccc
gcggaggacctgggccgggcggacaccacgggggtttccgtctcgcccggtgtcaaactc
gcagtggatcgttcacccggcaggcaggagtgccagagaccgccgcagagtaaacctaaa
atatggtctctggccgaaaccgccacggcccccgacagctctcacaaagcctccccggcg
gcctacgcgcaccaggccggcctggtctccccgggccacccggccctactcccggctcat
ggaatatatacgtgccagattggcaagctgcacaactgggccaacgcggctttgctgaat
gccaactctcttttgaacatgagatcgttcctgggaggcgcgccggccggacacctgcct
ctccaaggcgcgctgccggctgcgcgtcatgacgcacggccggcggccggcgcggggact
tcgggcacggaggacgacagcgacgtggagtcgtcgggaagtttcagtccaaaacgagat
gatgaggggagccatcacaggcccgagtccctgaagtctccatttcagctcatcactgac
agacctcatcaagggaaggcgccgcagcgagttctgaccacgacgttatga
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