Cololabis saira (Pacific saury): 133461239
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Entry
133461239 CDS
T09849
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03030
DNA replication
csai03420
Nucleotide excision repair
csai03430
Mismatch repair
csai03440
Homologous recombination
csai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133461239 (rpa3)
03420 Nucleotide excision repair
133461239 (rpa3)
03430 Mismatch repair
133461239 (rpa3)
03440 Homologous recombination
133461239 (rpa3)
03460 Fanconi anemia pathway
133461239 (rpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csai03032
]
133461239 (rpa3)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133461239 (rpa3)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
133461239 (rpa3)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
133461239 (rpa3)
MMR (mismatch excision repair)
133461239 (rpa3)
DSBR (double strand breaks repair)
HR (homologous recombination)
133461239 (rpa3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
133461239
NCBI-ProteinID:
XP_061598058
LinkDB
All DBs
Position
15:complement(25387160..25390200)
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AA seq
122 aa
AA seq
DB search
MAGVLDVPKTRVNCSMLAQNINQAVCFVGRVGKVHPNGKTFTVLDGEGKTATIELNMVLD
EELSGVVEVIGMVSNKGAVMATAYNILREDKGIPFDLELYNEALKVIQDFPQHYPFQVAS
SG
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtactggacgtcccgaagacgagggtaaactgctccatgctggcgcagaat
attaatcaagcggtctgcttcgttgggcgagttggaaaggttcatccgaatggaaaaacg
ttcacagtgttggatggagaaggaaagacggcgactattgaactcaacatggttcttgat
gaagagctgagtggcgttgtggaggtcatcggtatggtgtccaacaaaggagcagtcatg
gccaccgcatacaacatcctccgggaagacaagggcattccttttgatctggagctgtac
aacgaagccctgaaggtgatccaggatttcccccagcactacccctttcaggtggcttca
agtggatga
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