KEGG   Cololabis saira (Pacific saury): 133461239
Entry
133461239         CDS       T09849                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03030  DNA replication
csai03420  Nucleotide excision repair
csai03430  Mismatch repair
csai03440  Homologous recombination
csai03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    133461239 (rpa3)
   03420 Nucleotide excision repair
    133461239 (rpa3)
   03430 Mismatch repair
    133461239 (rpa3)
   03440 Homologous recombination
    133461239 (rpa3)
   03460 Fanconi anemia pathway
    133461239 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csai03032]
    133461239 (rpa3)
   03400 DNA repair and recombination proteins [BR:csai03400]
    133461239 (rpa3)
DNA replication proteins [BR:csai03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    133461239 (rpa3)
DNA repair and recombination proteins [BR:csai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     133461239 (rpa3)
   MMR (mismatch excision repair)
     133461239 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     133461239 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 133461239
NCBI-ProteinID: XP_061598058
LinkDB
Position
15:complement(25387160..25390200)
AA seq 122 aa
MAGVLDVPKTRVNCSMLAQNINQAVCFVGRVGKVHPNGKTFTVLDGEGKTATIELNMVLD
EELSGVVEVIGMVSNKGAVMATAYNILREDKGIPFDLELYNEALKVIQDFPQHYPFQVAS
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atggctggtgtactggacgtcccgaagacgagggtaaactgctccatgctggcgcagaat
attaatcaagcggtctgcttcgttgggcgagttggaaaggttcatccgaatggaaaaacg
ttcacagtgttggatggagaaggaaagacggcgactattgaactcaacatggttcttgat
gaagagctgagtggcgttgtggaggtcatcggtatggtgtccaacaaaggagcagtcatg
gccaccgcatacaacatcctccgggaagacaagggcattccttttgatctggagctgtac
aacgaagccctgaaggtgatccaggatttcccccagcactacccctttcaggtggcttca
agtggatga

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