Cololabis saira (Pacific saury): 133461349
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Entry
133461349 CDS
T09849
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133461349
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133461349
Membrane trafficking [BR:
csai04131
]
Protein recycling
Others
Others
133461349
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
133461349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
DarA_N
USP7_C2
Motif
Other DBs
NCBI-GeneID:
133461349
NCBI-ProteinID:
XP_061598215
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All DBs
Position
15:complement(5690145..5718618)
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AA seq
571 aa
AA seq
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MADVGGDEPRSAPPKTSRLGPGSSSSTSSTAGPGSATTTAVAATVMSGPRTVRIVKSESG
YGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIGKGDRILEVNGVSVEGA
THKQVVDLIRAGEKELVLAVLSVPPQEADGLEGVEEIQPNYDYSDKQAVPISIPTYKHVE
QHSERFVVYNVYMSGRQLCSKRYREFAILNQNLKREFSNFNFPKIPGKWPFTLSEQQLDA
RRRGLEEYLERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKN
STTDQVYQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTC
LALRKWLFSVQEEEFLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATY
LNLLRSCEGYNEVVFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEM
QRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDK
DNKNCSNNDYLPPLETQQKGWCHLGGEIATS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttggcggcgacgaaccccgctccgcgccccccaagacatcccgcctcggt
ccgggctccagcagctccaccagctccaccgcgggccccggctccgccaccaccaccgcc
gtcgcggccaccgtcatgtcgggtccccgcacggtgcggatcgtcaagtccgagtccggc
tacggcttcaacgtccgcggccaagtgagcgagggcgggcagctgcggagcatcaacggg
gagctgtacgctccgctgcagcacgtcagcgccgtgctgcccgggggcgccgccgaccga
gccggcatcggcaagggggaccggatcctggaggtcaacggggttagcgtggaaggtgcg
acccacaagcaggtggtggacctgatccgtgcgggggagaaggagctggttctagccgtg
ctgtctgttccacctcaggaagctgatggattggaaggagtggaggaaatccaacccaac
tacgactacagcgacaagcaagctgtgcccatttctattcctacatacaagcatgtggaa
cagcactctgagaggtttgtggtgtacaatgtgtacatgtcaggtagacagttgtgctca
aaacgctaccgtgagtttgccatcctgaaccagaacctgaagagggaattctccaacttt
aacttcccaaagattcctggtaaatggccctttaccctctctgagcaacagctggacgct
cgtcgtcgaggcctggaggaatatctggagcgagtgtgttctgttcgggtgattggggag
agtgatataatgcaggagtttctgtcggaatcagatgagaattacaacggagtgacagat
gtggaactgcggatagcgctgccagacaagaccaccatctctgtcagagtccgtaaaaac
agcaccacggaccaggtgtaccaggcattagtgatgaaagttggaatggacagtataatg
gcaagctactttgccctttttgaagttatcaatcattcctttgtgaggaagctggcgccc
aacgagttcccccacaagctttatgtgcagaactacacgtcagctgttccaggaacttgt
ttagcgctccgaaaatggttgtttagcgtccaggaggaggagtttctcagagataaccct
ctagcactgcactactgcttccaccaggcactggatgatgtgaagaagggattcataaaa
acagaggacaaatcctaccagctgcagaaactggcagagcagcgcaagatggctacgtac
ctgaacctgctgcggtcgtgtgagggctacaacgaggtggtgttcccccactgctcctgc
gactccaggaggaagggccacgtcatcacagccatcagcatccatcacttcaagctgcac
gcttgtaccgaggacggcacgctggagaaccaggtgatagcgtttgagtgggcagagatg
cagcgctgggacacggacgaggaggggatggctttctgcttcgagtacgccagaggagag
aagaaacctcgctgggttaagatttttactccatatttcaactacatgcacgagtgtttc
gagcgagtcttttgtgagctgaaatggaggaaacaggttgaggaagaggcatctgataaa
gacaacaaaaactgcagtaacaatgactatctgcctcctctggagacgcaacagaaggga
tggtgccatctagggggcgagattgcaacttcctaa
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