Cololabis saira (Pacific saury): 133461365
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Entry
133461365 CDS
T09849
Name
(RefSeq) serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133461365
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133461365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133461365
Spliceosome [BR:
csai03041
]
Common components
Common spliceosomal components
SR proteins
133461365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH_2
RT_RNaseH
RRM_1
Motif
Other DBs
NCBI-GeneID:
133461365
NCBI-ProteinID:
XP_061598238
LinkDB
All DBs
Position
15:complement(16716638..16718017)
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AA seq
315 aa
AA seq
DB search
MGNDLAGGKVLVTPEVTPIPVRQSPDELAQKFPKVFTSCAVTRSMYKNEEKDVDLSDSFL
CDPGEAHLCVPESAERVIVEHTKGPRRDGGYGGRSGYGRWGGRDRGRRNEGVIEFRQYSD
MKRALEKLDGTEVNGRKIRLIEDRPGAKSRRSYSRSRSRSRSRSRGRRSHKSRSRSDSSS
RSRSRSRAASRSRSRSHSKKSKSKSKKEEEERSNGAQKDDDHSRSRSQKSKKDRKKGKRD
SQSRSRSRSRSRSRSRSEVKDRSRKSVSKTDGQPFKLAVDASDTGVGAVLLQEGADGVEH
PVSYFSKKLDRHQKW
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgatttggctggtggaaaggttctggttacacctgaagtgacgccgatcccg
gttaggcagtctccagatgagctggctcagaagtttcccaaggttttcacatcttgtgct
gttactcgctctatgtataaaaatgaggagaaagatgttgacttaagtgacagttttctt
tgtgatcctggtgaggctcacttgtgtgttccggagtctgctgagagggtgatagtggag
cacacgaaggggccccggcgagatggaggctatggtgggaggagtggatatggacgctgg
ggaggaagagacagaggccgcaggaacgagggcgtgatcgagttcaggcagtactccgac
atgaagagagctctggagaaactcgacggcactgaggtcaacggcagaaagatccggctc
atcgaggaccggcccggcgccaagagccgccgctcttactcccgcagtcgcagccgctcc
aggtctcgctccaggggtcgcaggtcccacaagagccgcagccgcagtgacagcagcagt
cgcagccgctctcgttccagggcagcttctcgctctcgcagccgctctcacagcaagaag
agtaagagcaagagcaagaaggaggaagaggagcgcagcaacggcgcccagaaggacgac
gaccacagcaggagccgcagccaaaagagcaagaaagacaggaagaagggcaagagggac
tcccagtcccgctccaggtccagatcccgctccaggtctcgctccaggtcggaggtcaag
gatcgctccaggaaatctgtctccaagacagacggtcagccttttaagttagcggtagat
gcgagtgacactggggtgggcgctgttcttttgcaggagggtgctgatggagtggagcac
ccagtgtcttatttttcaaagaagcttgatcgccatcagaaatggtga
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