KEGG   Cololabis saira (Pacific saury): 133461399
Entry
133461399         CDS       T09849                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
csai  Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:csai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csai04121]
    133461399 (ubap2l)
   03400 DNA repair and recombination proteins [BR:csai03400]
    133461399 (ubap2l)
Ubiquitin system [BR:csai04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    133461399 (ubap2l)
DNA repair and recombination proteins [BR:csai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133461399 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N CUE
Other DBs
NCBI-GeneID: 133461399
NCBI-ProteinID: XP_061598275
LinkDB
Position
15:6696780..6735112
AA seq 1208 aa
MMTSMGGSRARGSWEQTQGQTQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDI
TGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKEISQAEAGEEG
KENRDKGGEKDAARRRGAAQRKGRGASRGREFRGQENGLDGAKAGIAGRGAERGRRGRGR
GRGAVGAAGRRGGRFSAQGMGQIDKGSRYDIAGDERTFNPADYAEPAQTDENYGGGSTWN
NTGSIELEEGPRLEYSGGEGTNYPPKFDSAPGAWRSAQEEWGTEDWNEDLSETKIFTASS
VASMPLPQESVTITKGQRIDLAVLLGKTPPSSSSETENPPMEGTQPPSLSQSLVFSNSKQ
GVPLSQTPSSTPYAPHSMGGMLGKGFGDVGDSKGASTGTTGSQFLEQYKTAQALAQLAAQ
HSQTGPTNTAPPTWDTSAASLGQYDMKSQPESGIHTPFTKRQPYQAATSTSSMLDVFLQD
KGLPTSSPVSSSSLTQQTTSSPHVGPSPASSLAKMAGVPSLGQQVSPSSSDAQGSSPLPL
QQHKLKQQKKRASITTKIPAMAVEMPGSTDISGLNLQFGALQFGSEPVLQEYESTPATTT
PGNQVQNSLYTSPSSDPTPALSNSSQMDMYDQRASKTRRYPPSVSSSPQKDIQTKNGFNS
MQSTQPGEVAAGSVVSIKPASDSVPPASISSMGALADSGSGPSSLLTATNQTSLTVLGHN
EDLPPSTIPPPQHNSHTSQQNSLAPSSVRTSNSSLMHPGVDGDSNLHSSFPSSVSAVPSS
SVPSSSSAAAAQVSLGTPQASSVGPATVSAPSGLGPVNSLAMGLNAASMGPPAAAPSTVS
VSTISSTIPSSASSSSTRSSAASSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGY
DDLQVLQTRIPLDYYSIPFATPTTALTGREGSLTSNPYSGDLSKFGRGDASSPAPATTLA
QTQQNQTQTHHTTQQPFLNPALPPGYSYTSLPYYTGMPGLPNTFQYGPAVFPVAPTSSKQ
HGVNVGVNASATPFQQASGYGSHGYSTGYEDVGQASGSGDFCKGGYGTAVAAAASAQNKP
ASSVTGPGVGVSVTSSNTGVPDISGSVYTKTQSFEKQGFHAGTPAASFSLPSALGSGGPI
NPPAAAGYAPAPFMHILAPHQQPHSQILHHHLQQDSQSGTGQRSQNASIQQKSQINKSAY
NSYNWGAN
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgatgacgtccatgggcgggagccgagcccggggcagctgggagcagacacagggccag
acacagacacagcacaagcagaggcctcaggcaaccgcggagcagatccgacttgcccaa
atgatttcagaccacaatgatgcagattttgaagaaaaggttaaacagctgattgacatc
acaggcaaggaccaggatgagtcgatgatcgctctgcatgattgcaatggggacgtgaac
agagccattaatgtcttgttagagggtagcccagacactgactcctgggaaatggtgggt
aagaagaaaggggtgtcgggtcagaaggagatcagccaggcagaagccggagaggaagga
aaagagaacagagacaagggaggagagaaagatgcagcacgtcgtcgaggtgctgctcag
cgtaaagggcgtggagccagcaggggacgcgaatttcgcggtcaggagaatggcttggat
ggagccaaagctggaatagctggaagaggggctgagcgaggccgacggggcagaggcaga
ggacggggagctgtaggagcagctgggcggcgaggaggcagattttcagcgcagggcatg
ggccagattgataaggggtccagatatgatattgcaggagatgagagaacattcaaccct
gctgactatgcagagcctgcccagacagacgagaactatggaggaggcagcacctggaac
aacacaggaagcattgagttggaggagggaccaagattggaatactctggaggagaggga
acaaattacccacccaagtttgactctgctcctggtgcctggaggtctgcccaagaagag
tggggcactgaggactggaatgaggatctgtcagagaccaagatattcacggcctccagt
gttgcatcaatgcctctgcctcaagagagcgttacaatcaccaaaggacagaggattgac
cttgcagtgctattgggaaagactccaccttcttcttcttcagagacagaaaaccccccc
atggagggcacccagcctccttctctgtcccagtcactggtttttagcaactctaagcaa
ggggtcccactatcccagactccctccagcactccctacgccccgcacagcatgggtggc
atgctaggcaagggatttggtgatgttggagacagtaaaggagcaagcacggggactact
ggctcccagttcctggagcagtataagacagcacaggcactggcccagctggcggcccag
cactcccagaccggccctaccaacacggctcctccaacctgggacaccagtgctgcgtca
cttggacaatatgatatgaagagtcagccagagtctgggatccatacgccctttacaaag
cggcagccctaccaggctgccacttccacctcgtccatgttggacgttttcctgcaggat
aaagggctgcctacatcctcccctgtctcctcttcttccttgacgcaacaaacaacatcc
tccccccatgtggggccgtcacctgcgtcctcccttgcaaaaatggcaggagttccttct
cttggtcagcaagtctccccaagttcctccgatgcccagggttcaagtccacttccattg
cagcaacacaaactcaaacagcagaagaagagggcatccattacaacgaagattccagct
atggcagttgagatgcctggatcgacagacatctctggcctcaatcttcagtttggagcg
ctgcagtttggttcagagcccgttctacaggagtacgagtcgaccccggccacgacaaca
ccgggcaaccaggtccagaacagtctctacacgagcccaagcagtgacccgactccagct
ctctccaactccagccagatggacatgtatgatcagagagcgtctaagacgaggcgttac
cctccttcagtgtcctcttctcctcagaaggatattcagaccaaaaatggcttcaattca
atgcaatcaacccaacctggagaagttgcagcagggtctgtggtgtccatcaagccagct
tctgattcagtcccgccagcatccatctccagtatgggcgcgttggcagacagcggctcc
ggcccgtcctccttgttgactgcaaccaaccaaacatctcttactgttcttgggcacaac
gaagacctgccgccaagcaccatccctcctccacagcacaactctcatacatcacaacag
aacagccttgctccatcttcagtccgaacatcgaactcgagtctgatgcatcccggcgta
gatggtgactcgaacctgcactcctctttcccttcgtctgtgtcggctgtgccatcttca
tcggtcccctcctcctcctctgcggcggctgcacaggtgtcactaggtactcctcaggcc
tcatcggtgggccctgccacagtttcggccccgtctggtctaggccccgttaacagtctg
gccatgggccttaacgctgcctccatgggccctccagcagcagccccttccactgtttca
gtctctacaatatcttcaaccattccttcttcagcaagttcttcttccacacgcagctct
gcagcatcctcagggaaagcacctccgaacctgccacctggagtgccccctctactgccc
aacccgtacatcatggcccctggactactgcacgcctacccgcctcaggtgtacggctac
gacgacttacaggtcctgcagacaagaataccactggattactatagtatcccctttgca
actcccacaacagcattgactggaagagagggaagtctgaccagtaacccttactctggc
gacttatcaaagtttggtcgaggcgacgcatcatctccagctccagccaccacattagct
cagacccaacagaatcagacccagacgcatcacaccacacaacagcccttcctcaacccg
gcgctgccccccggctacagctacaccagcctaccctattacactggcatgcccggcctg
cccaacaccttccagtacggacccgctgtgtttccggtggctcctacctcgtcaaaacag
cacggcgtgaatgtcggcgtgaacgcatcagccacgccctttcagcaggctagcggctac
ggttcccatggatacagcactggctatgaggatgtgggccaggcttcagggagtggggat
ttctgtaagggcggatacggcactgccgtggccgctgctgcttctgcacaaaacaagcca
gccagctctgtcaccgggcctggagtcggagtgtctgtgacgtcaagcaacacgggggta
ccagatatttcagggtctgtttacacaaaaacgcagtcatttgagaagcagggtttccac
gctgggaccccagcggcttcattcagcctgccgtcagcattggggagtggagggcccatc
aaccctccagcagctgctggctacgctccagcccccttcatgcacatcctggccccacac
caacaaccccactctcagatcctgcaccaccacctgcagcaagacagccagagcggcact
ggacagcgtagccagaatgcatctattcaacagaagtctcagatcaacaagtctgcatac
aacagctataactggggagcaaactaa

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