Cololabis saira (Pacific saury): 133461458
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Entry
133461458 CDS
T09849
Name
(RefSeq) DENN domain-containing protein 3-like
KO
K20162
DENN domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133461458
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133461458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
uDENN
dDENN
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Avl9
CIA30
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
133461458
NCBI-ProteinID:
XP_061598363
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Position
15:complement(7902760..7945739)
Genome browser
AA seq
1260 aa
AA seq
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MAELPSGLLEVCVVVGAQSEKLRDVYQSKSSEPHQLEAEVLQVHAPPFVSKQANSSQVIG
PSFSRVQRRRSFIKKKRRDRAAESNGETTKRAEAASVTEDVSVPKDLDLIALPQLCFPGG
LQLASEQREDTYHFLVFTDLFGNRTHGVVLQYHRSVQSCHEGVVQNGHRWNSSKSRLYAP
FAVCIISKFPYYNALKDCLSCLVVQLRTARQGDFENTIKEFSAKLTLVPLPPPGQLHVSF
SLRPLQVVLPSRVDQDSPIIDIDLHLPLLTFTHATLLQILSCLLQEQRVVLFSSDWARLT
LVAESLLLYLQPLFWQQPYVPVLARGMLDFLMAPTAFLMGCHISHFEEVAAETEDLILVN
VDDGIIQSSLSETIDLPTIPMAAAESFISRAECLQLHYDLELCHFGAGTDVNTLRSQRRE
WQKRLNSQIQNIALELVVNIFSGVQDFLNHEHRVFNSEEFLRTREPAEQLFYKKVLETHI
FHSFLRDRLNRKWDSFSRMEQNTRNHAHRNRAMTESPRRPPMSELSKSGCSSYTSPDHRL
SKRLGASLPNLDQPGNDAVTLSVINFNRPQSVRKMTPDTGLKSPQKTVKVFRLPEFPPPL
AYQYVQNYYADMISSLGKAINATPPEESALLARYHYLRGLVNTVSNRCLDALEDFQSLYK
TDAEIFPPQMVKSLVDSLPDVERLQADRRPDIRRLISRVKRDQERERACKGNGHEEDAVK
HFQLPKTFMQLEEFVKCVQESGIVKDQGAILRLFDALTVGHQKQVGPDLFKVFYTIWKET
EAEAQEVCLPASVLEHIEAGECVFKLSSSVKTSRGVGKIAMTQRRLFLLTDGRAGYVEVA
QYRDLEEVKVSSSPFLLLRIPGLKLRVRGRKETFEANLKTETELWNLMIKEMWAGRILAD
QHKDPQYMQLALTNALLMDAVVGSLQSSKAIYAASKLAHFERIKMEVPMMVPKTTAETLK
HKINPSLELTAPQAVDVLLYTPGQLWVSVSGGKVMVFDASSWSRTHTCQVGNARLNCMVR
VEKDQVWMGSEDSVIYIISMVSMVCNRQLTEHRAEVTGLALDMDKYSQKVAYSCSAEGTV
MVWDVSTLQVKRHFRLSCDRLLSVNSCAGMLWCCSRDSIMEVWRSGSLKHRVTLPEQQRA
ALSCALLLPESEELWSVCADSGEVCIWHIRNSSEPSRRLVLQDCSGCYCMIKVKNQVWVG
GVGRSSSKGKVYIVDTDRYEVLKELHGHTDKVTALCSAEDRYALSGAGKHDGKIAIWKVE
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctcccatctgggctgctggaggtgtgtgtggtggtcggagcccagagtgag
aagctgcgagatgtgtaccaaagtaagtcaagtgagccccaccaactagaagccgaggtg
ctccaagtccatgctccgccttttgtttccaagcaggccaactccagccaagtgattggt
cctagttttagccgtgtccagaggaggaggagctttattaaaaagaagagaagagatcgt
gctgctgagtctaatggagaaaccaccaaacgtgccgaagcggcatcagtgacggaagac
gtcagtgttcctaaagatctggacctcatcgctttgccacagctctgtttccctggtggt
cttcagttggccagtgagcagagagaggacacctatcacttcttggtttttactgatctg
tttgggaaccgaacccacggtgttgttttgcagtaccaccgatccgtacagtcctgtcac
gaaggtgttgtccagaatggccataggtggaattcatcaaagtctcgtctctacgcacct
tttgccgtgtgcatcatttccaagtttccttactacaatgccctgaaagactgcttgtca
tgtctggttgttcagttgcggacagcaagacaaggtgactttgagaacaccatcaaggag
ttttcggccaagctcaccctggttcccttaccgccgcccggacagctgcatgtgtctttt
agtctccgtcctcttcaagtggttctcccgtccagagtggatcaggacagccccattatt
gacatcgacctccatcttccactcctcaccttcactcatgcgaccctgctccagatactc
tcctgcctcctccaagaacagagggtggtcttattctcgtctgattgggccaggctcact
ctagtagccgagagtctgctgttgtacctgcagccactgttctggcagcaaccttatgtt
cccgtcttagcaagaggaatgctggatttcctcatggctccgactgctttcctgatgggc
tgtcacataagtcattttgaagaggttgctgcagagacggaggacctaatcctcgtgaat
gttgacgatggcatcattcagtcatctctgtctgaaaccatcgacctgcctaccattccc
atggctgcagcagagagctttatatcaagggcagaatgcctccagcttcactacgacttg
gagctgtgccacttcggagccgggactgatgtcaatactcttcgatcccaacgcagagag
tggcagaaaaggctcaattctcagatacaaaacatcgccctggagctggtggtcaacatc
tttagtggtgtccaggactttcttaaccacgagcacagagtttttaacagtgaggagttt
ctgagaaccagggagccggcagagcagctgttttacaagaaggtgctggaaactcatatc
tttcactcgttcctgcgagacaggctgaacaggaaatgggacagcttcagccgcatggag
cagaacacacgcaaccatgcacacaggaatcgtgcaatgaccgagtctcctcgtcgtcct
ccgatgtccgagctgtccaagagcggctgcagcagctacaccagtcccgaccaccggctc
agtaaacggctgggagccagcctgcctaatctagatcagcccggcaacgacgctgtgacg
ttgtcagtcatcaacttcaacagacctcagtcggtcaggaagatgacccctgacaccggg
ttgaaatctcctcagaaaactgtgaaggttttccgtctaccagagttcccgccgccgctg
gcctaccaatatgtccagaactattacgctgacatgatttcttcactggggaaggctatt
aacgctacaccacctgaggaatctgctctgctggccaggtaccattacctacgtggtttg
gtaaataccgtgtccaaccggtgtcttgatgcattagaggacttccagagcctttacaag
acggatgcagaaatcttccctcctcagatggtcaagtctctcgttgactccttaccagac
gttgaacgtttacaggcggacagacgaccagacatcagacgccttatcagtcgggttaaa
agggaccaggagcgggaacgtgcttgcaagggcaacggacacgaggaagacgctgtaaaa
cacttccagctgcccaaaacattcatgcagctggaggagtttgtgaaatgtgtccaggag
tccggcattgtaaaagaccagggagctattctcagactctttgatgctctgactgtaggt
catcagaagcaggttggccccgacttgttcaaagtgttttacaccatctggaaggagacg
gaggccgaggcccaagaggtgtgtctgccggcgtccgtgctggaacacatcgaggccggc
gagtgcgtcttcaagctctcgtcctcggtcaagaccagccggggcgtgggcaagatcgcc
atgactcaacgacggctcttcctgctgactgatggacgggcaggttacgttgaagttgca
cagtacagagatttggaggaggtgaaggtgtcttcttcccccttcttgctcctgagaatc
ccaggcctaaagctgcgagttcgaggaaggaaggagacattcgaggccaatttgaaaacg
gagactgagctttggaacctgatgatcaaagagatgtgggctggacgcatattagctgac
caacacaaggatccccagtatatgcagctggctctgaccaacgccctgttgatggatgcg
gtggtgggaagcctgcagagcagcaaggccatctacgcagcgtctaagctcgctcacttt
gaacgcatcaagatggaagttccaatgatggttcccaagacaactgcagaaacgctgaag
cacaaaataaacccttccctggaactgactgcacctcaggctgtggatgtacttttgtac
acaccaggtcagctgtgggtgtcggtgagcggggggaaggtgatggtgttcgatgcttcc
agctggtcccggacacacacgtgtcaagttgggaacgccagactgaactgcatggtgcga
gtggagaaggatcaggtgtggatgggctcggaggactcggtcatctacatcatcagcatg
gtgtccatggtctgcaaccgacagctgactgaacaccgggccgaggtgaccgggctggcg
ctggacatggacaaatacagccagaaggttgcgtattcctgcagcgcggaaggaactgtg
atggtgtgggacgtctcaactctgcaggtgaagaggcacttccgtctgtcctgtgatcgc
ctgctgtctgtaaacagctgtgctggaatgctctggtgttgttcaagggacagcataatg
gaagtttggaggtctggttctttaaaacatcgtgttactttgccagaacaacaaagagca
gcactcagctgtgctctgcttttacctgagagcgaggagctgtggagcgtatgtgcagac
tctggagaagtgtgcatttggcatattagaaacagcagcgaaccctcccgccgtttggtt
ctgcaggactgctctgggtgttactgcatgattaaagttaaaaaccaggtgtgggttgga
ggcgtaggccgcagttcaagcaaagggaaggtttacatcgtggacacggaccgctacgag
gttctgaaggagctccacggtcacaccgacaaagtgacggcgctctgctcggcggaagac
cgctacgctctcagcggagccggcaaacacgacggaaagatcgccatctggaaggtggaa
tag
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