Cololabis saira (Pacific saury): 133461477
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Entry
133461477 CDS
T09849
Name
(RefSeq) E3 ubiquitin-protein ligase RNF19A-like
KO
K11972
E3 ubiquitin-protein ligase RNF19A [EC:
2.3.2.31
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133461477
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
133461477
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
133461477
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-C3HC4
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
133461477
NCBI-ProteinID:
XP_061598403
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All DBs
Position
15:9932697..9955803
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AA seq
845 aa
AA seq
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MSSLHHGSTGSERDLHSAASSVSLPSVRKTPKKRRLSLHSLFGRRCRPDRDAKRKSRTLQ
PAAGVDGIASIESVHSDTSHDKTSIQPPSDVASTSSVPGSSSDLLECPLCLLRHGRERFP
DIMTCHHRSCADCLRQYLRIEISESRVNISCPECSERFNPHDIRMILGDRALMEKYEEFM
LRRWLVAEPDCRWCPAPDCGYAVIAFGCASCPKITCGREGCGTEFCYHCKQLWHPNQTCD
TARQQRAQNLRLRTFRSSSLSYSQESGAAGDDIKPCPRCSAYIIKMNDGSCNHMTCAVCG
CEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKKILWQLGTLVGAPVGIALIAGIAIPA
MIIGIPVYVGRKIHNRYEGKDISKHKRNLVIAGGVTLSVIVSPVVAAVTVGIGVPIMLAY
VYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENENIGGAAAATDTTSVAETRLNNPSLGD
GASVGGLTGLSLSVSGSHMERCGVSSAQRDNMSDNASTTALAGTSITGSLSGSCYNRMEV
QADVQKERCSLSGESATVSLGTVSDNASTKAMAGSILSAYMPLERDNSLEVQADVEPKQD
KVRHGSASSSLDGASCSSSAGVKGAGSSTCPCSCPSTCCSDQQSNYHCCPSSPWSKEPST
SGGKRCKSTLWRGASSSKGESKIDETQGDVDAQLLEQRSTNSSEFDSPSLSGSLPSVADS
HCSHFSSELSCSEPETSKPAHAQGSPPGEPHLHHSTVTALPEVEHDRLEHVPPQSGYPAF
THSLLSSSPPASPREGSSGTFLYISEEGGSEDADTGPEKDTKETTSSTATPSVSPVRKHC
IQTDI
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctccatcatggcagcacaggctcagagcgagaccttcactctgccgcttcc
tctgttagccttccttcagttagaaagacgccaaagaaacgtcgtctatccctccattca
ctctttggccgacgctgcaggcccgaccgcgacgccaagcgcaagtcgcggactttgcag
cctgcagctggagtggatggcatcgccagcattgaaagtgttcattcagacacttcccat
gacaaaacctcaatccaacctccttcggatgtagcatcaacctcatcagtgccggggtct
tcctcagatctactggagtgtcctctgtgcctgctgcgccacggacgcgagcgcttccca
gacatcatgacctgtcaccaccgttcatgcgcagactgcctgcgacagtatctgcgtatc
gagatatccgagtcccgtgtcaacatcagctgccccgagtgctcagagcgcttcaatccc
catgacatccggatgatcctgggagaccgagccctcatggaaaagtatgaggagttcatg
ctgaggaggtggctggtggctgagccagactgccgctggtgcccggctcctgactgcggt
tatgcagtcatagcgtttggctgtgccagctgccctaagatcacctgtggccgtgagggc
tgtgggactgagttctgctaccactgcaaacagctgtggcatcccaaccagacatgtgac
acggcacggcaacaaagggcccagaacctccggctaaggactttcaggtcatcctccctc
agctacagccaggagagtggagcagcaggtgatgacatcaagccctgccctcgttgctct
gcgtacatcatcaaaatgaacgatggaagctgtaatcacatgacctgcgctgtctgcggc
tgcgagttttgttggctctgcatgaaggagatctctgacctgcactacttaagcccatca
ggctgcaccttctggggaaagaagccctggagcaggaagaagaagattctgtggcagctg
ggcacgttggtgggggcaccagtgggcatcgccctcatcgctggtatcgccatcccggct
atgatcattggcatcccggtctatgtgggcagaaagattcacaatcgctacgaaggcaag
gacatttccaaacacaagaggaacctggtgatagctggaggtgtgacgttgtctgtgatt
gtgtcaccagtggttgctgcagttactgtgggtattggtgttcccataatgcttgcttac
gtctatggggttgttccaatctccctgtgccggagtggcggttgcggcgtgtctgccggg
aacggcaagggagtgcgaatcgagtttgatgacgaaaatgaaaacatcggtggtgcggca
gcagccacagacacgacctcagtggcagagactcggctcaacaacccgagcctgggagac
ggagcgagtgtcgggggtctgacgggcctgagcctcagcgtcagcgggagccacatggag
cgctgcggcgtgagctcggctcagcgggacaacatgagcgacaacgccagcaccacggcc
ctggccggcaccagcatcaccggcagcctgtctggcagctgctacaaccggatggaagtc
caggctgatgttcagaaggagcgctgcagtctgagtggcgagtcggccaccgtcagtctg
gggacggtcagcgacaatgcgagcacaaaagccatggcgggatccatcctcagtgcctac
atgcctctggaaagagacaacagtctggaggtgcaggcggacgtggagcccaaacaggac
aaggtgagacacggcagcgccagcagcagcctggacggagccagctgcagcagctctgcg
ggcgtcaaaggagctggcagtagcacatgcccgtgctcgtgtccctccacctgctgctcc
gaccagcagagtaactaccactgctgcccctcgtccccttggtccaaggagccttccact
tcagggggcaaaaggtgcaaaagtactctttggagaggagctagcagcagcaaaggagaa
tctaaaattgatgaaacgcaaggggatgtagatgctcagcttctggagcagcgcagcaca
aactcttctgagttcgattccccgtccctgagcggcagcctgccctccgtggccgactcg
cactgcagccacttctcctcagagctgagctgctcggagcctgaaacctcaaaaccagct
cacgcacagggctcccccccaggggagccccaccttcaccattccactgtcacagccctg
cctgaggtggagcacgatcgcctggagcacgtcccccctcagagtgggtacccagccttc
acccacagcctgctgtcttcctccccacctgcatcgccgagagagggaagtagtgggaca
tttctgtacatcagtgaggagggtggaagtgaggatgcagacacagggccagaaaaggac
acgaaagagaccaccagcagcacagcaacgccgtctgtaagcccagttaggaagcactgt
atacaaaccgacatctga
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