Cololabis saira (Pacific saury): 133461486
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Entry
133461486 CDS
T09849
Symbol
jarid2b
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133461486 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133461486 (jarid2b)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
133461486 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
133461486 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
133461486
NCBI-ProteinID:
XP_061598417
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All DBs
Position
15:10272756..10375653
Genome browser
AA seq
1467 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVMRKVLYLSLKEFRTAQKRQLDGDGTANSNGSL
TNGQLNGSGSKGSHKEDGSLRSQGLHGSNEYGEDGPAKKRPRLQAQRKFAQSQPNSPSTT
PVKVADPGGLSSSLAAVPSTSLSSLSSSSLSSSIQDLSRRKPKTEDFLTFLCLRGVCSGS
PALPNNMAYFGSSQEEDDLEEEDEEEETEARSGGAVHSNGAGSISQTSASSSCHSTPRKG
KLPPRQPLNGHVFHSQTKAGTRESPRPKAGTHGRDGPAPPPPPHLLRERSERAEAREQAR
EQQAMASGRGSANGLPPRRAAEELRKQVSKVNGLMRASSAQAAGVAKKSRDVRLPSKTVK
KYTATVSKGHVTYTKAKLKELGKKTKLSSSNKHNSAASALSSANNHNQHSQPAASNGLAN
SGKAAAPAHHSNAKTRKQVLLSNGLHNVAANTRPNGRLNGQRHNPLVREDGQKQGQAGQG
QCLGREGLRNSKRRLEVVLNSVSTGLVEQKAKSSGAEAKKAKIQPAPLETRSSSKKVAHE
EKDSKQNVTPTTPVSNGQESEKKASPRQTQPVTPPPPSTSPPEQASPPSTPAAKVEPVNQ
RPKRASAGKLMLIRQAQQQQSRSHGRSSSSSSPSIGQNHSPNPSCASTTSDPQQTSLSSS
STSSPLTSTKSPAQLKPAASRPADRDKEWEREKELTRQKEREQEKEWDRQRSKPEGWPAL
GEAPVFRPAPKEFQDPLVYLDAAREQAEVAGLCRVAPPPDWRPECKLNEEMRFVTQVQRV
HMLGRRWGPNVQRLACIRKHLKSQGITMDEPPVIGGCEVDLSRFFQLINDMGGMQQVMDL
KKWTKLADLLRIPKSAQDRLAKLQEAYLQYILSYDSLSAEERLQLLADVLEEKKTLESRR
GPLEGLSDSSPPNGLSLPRYEPKNGLVGGTVGGPTGHHRSNGNYHHLKLEAQVKAGRRRL
FAQEKQGKEDRQHGEEQEEDRGVFSDQHKCIYKGKSVSLTNFFRIARNTMTMCFSKEPGA
AEVEQEYWRTVEQRDSHVAVHCGKVDTSTHGSGFPTGKSEPFSKHGWNLNVLPNNSGSIL
RHLGAVPGVTIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKAKLDKV
VHTLLQANGTPGLEMLEKNIMISPEVLCREGIKVYRTVQRSGQFVVCFPGAFVSKVCCGY
SVSETVHFATPHWMNLGYQAAKDLKCRRIAKPFSMEKLLYQIATAESKRDNGLLLTTISA
LLKDLRNIEMRQRQELYKAGLLSSARYGTHDGGLGPGEGRKKPRGKWLALESSERRCQIC
QHLCYLSMVVQETDNVVFCLECALRYVEKHKSCRGLKMMYRYDEEQINSLVNQVCGRAML
KNGSGGGGVGGGGGGGGGGGVGSGGGGGGGGGGGGAVVISGGGGDSCHGLSPAKASPAKR
GPRKRATVEVSLARLSSTHMPKAAAVS
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagcgaaatatcattcaaaagaaatatgacgacagtgatggc
atcccgtggtcggaggagcgggtgatgagaaaggtcctttatctttctctgaaggagttt
aggacggcacaaaaacgacagctggatggtgacggcaccgctaactccaacggttcccta
accaacggacaactgaacggctcggggtcgaagggcagccacaaagaagatggctccttg
cgctctcagggcctgcacgggagcaacgagtacggcgaagacggtcctgcaaaaaagagg
cctcgcctccaggctcagaggaagtttgcccagtcgcagcccaactcgcccagcactacg
cccgtcaaagtggccgacccaggcggcctgagcagcagcctggctgccgtaccatccacg
tccctctcatcgctctcctcgtcgtccctgtcctcctccatccaggacctgtccaggcgc
aagcccaagacggaggacttcctcaccttcctctgcctcagaggtgtgtgctcagggtca
cctgccttgcccaataacatggcctactttggaagctcccaggaggaggacgacctggag
gaggaggacgaggaggaggagactgaggcgcggagtggaggtgctgtccactctaatgga
gcaggaagcatcagccaaacctcagcctcgtcttcctgccactctacaccccgcaagggc
aagctcccccccaggcagccgctcaacgggcacgttttccacagccagactaaagcaggg
accagggagagtccgcggcccaaggcggggacccacggcagggacggccccgccccgcca
ccgcctccacacctgctgagggagcgcagcgagcgggcggaggcgcgggagcaggcgcgg
gagcagcaggccatggccagcgggcgagggtcggccaacgggctcccgcccaggagagcg
gccgaggagctccggaagcaggtctcaaaagtgaacgggctgatgcgggcgagctcggca
caagctgctggtgttgccaaaaagagccgtgatgtccgactgccgtccaaaactgtgaag
aagtacacagccaccgtgtccaagggccacgtcacctacaccaaagccaaactgaaagaa
ctgggcaagaaaaccaaactcagcagcagcaacaaacacaacagcgccgcctcggcatta
tcgtcagcgaacaatcacaatcagcacagccagccagcagccagcaacgggctggccaac
tcaggaaaagcagcagcaccagctcaccacagcaatgcaaaaacccgcaaacaggtgcta
ctatccaatgggctgcacaacgtggctgccaacacccggcccaacggcaggctgaacggg
cagcggcacaaccccctggtccgagaggacgggcagaagcagggccaggcgggccagggc
cagtgcctgggccgagaggggctgcgcaactccaagcggcgcctggaggttgtgctaaac
tcggtgagtacagggctcgttgagcagaaagccaaaagcagtggcgccgaggccaagaag
gccaagatccagcccgcgccgttggagacgcgcagcagcagcaagaaggtggcgcacgag
gagaaagacagcaagcaaaacgtcacccccaccactccggtttccaacggacaggaatca
gaaaaaaaagcctctcctagacagactcagcctgttactcctcctccaccttcgacttcc
ccgcctgaacaggcgtcacctccttcgacaccagcagccaaagtggagccggtgaaccag
cggcctaagcgcgcatcggcgggcaagctgatgctgataagacaagcacagcagcagcag
agcaggtcacacggtcgtagctcctcctcttcctccccctcaataggccagaatcactca
ccaaaccccagttgtgccagcactacctcagacccccaacagacgtctctgtcctcctcc
tccacctcctctcctctcacttcaaccaaaagccccgcgcagctcaaaccagcagcgtcg
cggcccgctgatcgcgacaaggagtgggagcgcgagaaggagctgacgcggcagaaggag
cgcgagcaggagaaggagtgggaccgccagcggagcaagcccgagggctggccagcgctg
ggggaggcccccgtcttccggccggctcccaaggagttccaggaccccctggtgtacctg
gacgcagcgagggaacaggccgaggtggccggcttgtgccgcgtggcgccgccgccggac
tggcggccggagtgcaagctgaacgaggagatgcgtttcgtgacgcaggtgcagagggtc
cacatgcttggccgacgctggggccccaacgtgcagcggctggcttgcatccgcaagcac
cttaaatctcagggcattaccatggatgagcctcctgtgatcggtggctgcgaagtggac
ctgtcacgttttttccagctcatcaacgacatgggtgggatgcagcaggtgatggacctg
aaaaaatggaccaagctcgccgaccttctccgcatccccaagtctgcgcaggaccgcttg
gccaagctgcaggaagcgtacctccagtacatcctctcctatgactctctcagcgccgag
gagcgcctgcagcttctggccgacgtgctggaggagaagaagaccctggagtcgcgccgg
ggcccgctcgaaggcctctcggattcttccccgcccaacgggctctcactgccgcgctac
gagcccaagaacgggctggtgggcgggacggtgggagggccgacggggcatcaccgcagc
aacggaaactatcaccatctgaagctggaggctcaggtcaaagcgggccggcgccggctc
ttcgctcaggaaaaacaaggaaaagaggacaggcagcatggagaggagcaggaggaggac
agaggtgttttcagtgaccagcacaaatgtatttacaaggggaaatcggtgtccttgacc
aacttcttcaggatagcccgtaacaccatgaccatgtgcttcagtaaggaaccaggggct
gcagaggttgagcaagaatactggaggaccgtggaacagagagacagccatgtagcagtg
cattgtgggaaggtggacacaagtacacatggcagcggattccccacaggaaagtctgag
ccattttcaaaacatggatggaacctcaacgtgctcccgaacaactctggatccatactg
aggcatctgggtgctgtgcctggggtgaccattccctggctcaacattggcatggtcttt
tctacctcatgctggtctcgagaccaaaatcgccttccatatattgattacttacacact
ggtgctgattgcatttggtattctgtccctgctgaggagaaggctaagctggacaaggtg
gtccatacactgcttcaagccaacggcaccccaggactagaaatgttggagaagaatatt
atgatctctccggaggtgctgtgccgtgaaggcatcaaggtttaccgtacagttcagcgg
agtggccagttcgtggtctgcttccccggtgcctttgtctctaaagtttgctgtggctac
agcgtgtcagagaccgtgcactttgccacaccacactggatgaacctgggttaccaggct
gcaaaggacctgaaatgtcgtcgtatagccaaacccttctccatggagaagctactgtat
cagatcgccaccgctgagtccaagagggacaacggtcttctcctcaccaccatctccgcc
cttctcaaagacctcaggaacatagagatgcgccaacgtcaggaactttacaaggcaggt
ttgctctcctctgcccgctacggcacacacgacggcggcctgggccccggcgagggccgc
aagaaaccccgcgggaagtggctggctctggagtcctcagagagacgctgccaaatctgc
caacatctctgctacctgtccatggtggttcaggagacggacaacgtggtcttttgtctg
gaatgtgccctgcggtacgtggagaagcacaagtcctgcaggggtctgaagatgatgtat
cgatacgatgaggaacaaatcaacagtttggtgaaccaggtgtgtggacgagccatgtta
aagaatggaagtggaggaggaggagtaggcggaggaggaggaggaggaggaggaggagga
gtaggaagcggaggaggtggaggaggtggaggaggtggaggaggagcggtcgtcatcagc
gggggagggggggactcctgccacggtctaagccctgccaaagcatcaccagccaagcga
ggcccacggaaacgtgccacggtggaggtgtccctggcccgcctgtcctccacccacatg
cccaaagctgcagctgtgtcctga
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