KEGG   Cololabis saira (Pacific saury): 133461499
Entry
133461499         CDS       T09849                                 
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
  KO
K19619  tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
csai  Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:csai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csai03400]
    133461499 (tdp2b)
DNA repair and recombination proteins [BR:csai03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     133461499 (tdp2b)
SSDB
Motif
Pfam: UBA_4 Exo_endo_phos Exo_endo_phos2 UBA_8 TAP_C
Other DBs
NCBI-GeneID: 133461499
NCBI-ProteinID: XP_061598441
LinkDB
Position
15:11055922..11062284
AA seq 359 aa
MASTSNTENASSSNTVSNVEEEARARLCAEFAAIAGTNSGETRRHLAEHGWDVERALNSF
FEADMDKLFEEDLQENEGSPKPKRQKVQEKPAQACIDLTGDSPSEEDNHKLSLISWNVDG
LDTNNLPERARGLCSFLVLYTPDVVFLQELIPSYIDYLRKRAVSYMIIEGGEEGYFTGMM
LKKSRVKFVESEIVAYPTTQMMRNLLVTQATFKGQKLCLMTSHFESCKGYAEERMKQLRV
VMQKMKDAPDDVTSLFGGDTNLRDTEVAKVGLPSSVCDVWERLGKEEHCRYTWDTKANSN
KTVPYVSRCRFDRVYFRPAAKEGVPRLAPDHMALVGLEKLDCGRYTSDHWGIYCSFTAG
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggcgtccacatccaacacagagaacgcttcttcatccaacactgtttccaacgtggaa
gaagaagccagggctcgtctttgcgcggagtttgctgccatcgcgggaacaaacagcggc
gagacccggcgacacctggccgagcacggctgggacgtggagagagctctcaactctttc
tttgaggctgacatggataaactgtttgaagaagatttacaagagaatgagggcagcccc
aaacccaagcggcagaaggtccaggagaaacctgcacaagcctgcatagatttgactgga
gacagtccttctgaagaagataatcacaagctatcgctgatttcttggaacgtggatgga
cttgacacaaacaaccttccagagcgtgccagaggcctgtgttcttttttagtcttatat
actcctgacgtggtgttcctgcaggaactcattccatcctacatcgactacttgagaaaa
cgggctgttagttacatgatcattgaaggtggtgaggaaggttacttcactgggatgatg
ctgaagaagtcgcgagtcaaatttgtggagagtgagatagtagcttaccccaccacccag
atgatgaggaatctactagtaactcaggccacgttcaagggccagaagctgtgtctgatg
acgtctcactttgaaagctgtaaaggctacgcagaagagcggatgaaacagctgcgtgtg
gtgatgcagaagatgaaagatgctcctgatgacgtcaccagcctgtttggaggggacaca
aaccttagagacactgaggtggctaaagtgggcctgccgtccagcgtctgtgacgtgtgg
gagagactgggcaaagaagagcactgccgctacacgtgggataccaaagccaacagcaac
aagaccgttccctacgtcagccgctgtcgctttgaccgcgtctacttccgcccagctgcc
aaggaaggtgtcccccgtctggctcctgatcacatggccctggtggggctggagaagctg
gactgtggccgttacacgagtgaccactggggaatctactgtagcttcactgctggatag

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