Cololabis saira (Pacific saury): 133461509
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Entry
133461509 CDS
T09849
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133461509 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133461509 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133461509 (nup153)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133461509 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
133461509
NCBI-ProteinID:
XP_061598453
LinkDB
All DBs
Position
15:11189337..11213067
Genome browser
AA seq
1475 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQSGIISRVTDTVKSIVPSWLQKYFKNEDGPEADG
AQGPDQNCQPPLPPPPPNGSEEEPPPFDGRDSPEPSTSTTGTSSSLFTQPSTSSAPGPFS
TGFSLVKEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTNSAPQ
PSQSSLKRPSFNLSVFGNSSNSSLNSTVLNSSQLGDSPFYPGKTVYGGAAALRSSRGRPG
TPYQAPVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPAAAASNFSPSV
DDTNLDISHVQSKKKRMDSTLPPIQKLVVPSASPVLGNRTVSFKPTLTPGGLSRSLGRTT
REKTPARQSPQLPEPTPSPFQSTRSSGGPSYPLSSTPAASSASTGGGKMKRERTTTRPSK
CPEENEVVELPALPAISLPLSTSSLPTFSFNMAPPISSPSVSSTPKTMAVTPAKENVFNK
DPPKALTPPCVPFTFSSPIVKATAASPPSFSTSPEFTFSAPVAKLGPSMSNGNLTSPIAG
LVKPQTSKTTEDFEGPFKPAKTLKQGSVLDLLKSPGFASPVAQTSPGSNATPQPTSPQFT
APLSTTSTSSSSRSSSMESGIMFRASAGKSCDKCSVQNKQSDAKCVCSVAPKPTSSFNSL
DSKQSSINSVALESSSTNTSSATTTTTGFGTIFSKPSGTWDCDTCLVVNKPDAVKCVACE
TAKPGTGLKPSLTFPSPFSADKTISTPTPPVSTSFSGFGDKFKKPEGAWECDTCMVQNKA
GDTKCVACMTPKPGATADTSSSSSAPMFGLGDKFKKPEGAWECDVCLVQNKASDVQCVAC
QTAKPGASVEPKAFGSFNSLAGGTPGLSTSTSGGFKFGTTDSTSGSGGFKSGSSAWESSS
TPSGGFKFGIASGNSSSESSSKDTTASPGFKFGNSSGGFKFGAGPTDDKKSDQSAAAGSS
FKFGVGGGIVFGTGSSSTEGSSSKGGFTFGLSKPTEEVTETTTSSSSTVSFTPPSQEKSD
NATSSNDTTATNTNAPTTTTTTTGSVFDRLGERSLTTNTPKVSSTFGALQADKEPPAPTF
TFGKPEEKKEAASSPAPSNFVFGAASKDADSAPAPAALGGFSFGKSGGPAEQAQTGFSFS
KPAEKTEPSASEAPKPTFNFGQSAADSPAAPKPSYSFMANNPTTNTTTTSSSPIPSLFGA
GTNGNNSSTAAPAPAAALAAAPSAFIFGQPSTATSDAAPAKTFVFGQNQDNQPSAPSSAP
LNTAPAPAPAQPFIFGGPAAPVAPAAPAAAAPSFSFGAAATAAASTSATSAAPSPFAFSS
APSGGFGANQAPPSFGSPFGSPFTGTPSQTPAFGAKSNAAPVFGQQTNSTPAFGATSSAA
PSGGFQFGGASAFGNVSNNNTGVFTFGGGPAASPAPPAPPANPAVTLQLGGAGAGFNFSQ
PPTFNIGSAKAFTSSPAGQQTIAGRKIKTAVRRRK
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaatcagaagcaggagatatcacattgcttctaaacct
tacgccaagagcaaacagcagtcaggcatcatcagtcgagtgacagacacagtgaagagc
atcgttccttcctggctgcagaaatacttcaagaatgaagatggtcctgaagcagatgga
gcccaaggcccagaccagaactgccagccgcctctccctcctcctcctccgaatggcagt
gaggaggaacctcctccctttgacgggcgtgactctccagagccaagcaccagtaccaca
ggaacctccagcagcctcttcacccagccgtccacctcctcggctcctgggcctttttcc
acgggtttctctttagttaaggaaatcaaggacaacctctcgcaacacgaagatgataac
atctccaccacaagcggattctcctctcgtgcatctgacaaggatgtccccacctccaaa
actgcatcacttcctcagctttggtccccggagatggacagaacaaactctgcacctcag
ccttcccaatcaagcctgaaaaggccttctttcaacctgtctgtctttggaaattcctcc
aactcatctttaaacagcacagtgctgaactccagccagcttggggactcccccttctac
cctgggaagaccgtgtacggtggggccgctgccctcaggagctcccgcggtcgtccagga
acaccttaccaggctccagtgagaagacagatcaaggccaagcctgctggggctcagccc
tgcggggtgaccagcgccactgcaagacgcatcctgcagtccttggagcggatgtccagc
ccacttgctgatgctaaaagaatcccagcagcagccgcatctaacttctcaccatcggtg
gatgacacaaatctggatatttcacatgtccagtccaaaaagaaacggatggattcaacc
ctcccaccaatacagaagcttgtggttccttcagcttccccagttttaggaaatcggacg
gtgtccttcaaaccaactttgacacctggtgggttgagccgatctcttggcagaaccaca
agagaaaagacgcctgcaagacaatcaccacagctacctgaacccactccaagtccattt
caaagcacaaggagttctggtggccctagctatcctctgtccagcacccctgcagccagc
agcgccagcactggggggggtaagatgaagagagagaggaccactacccggccctccaaa
tgtcctgaagaaaatgaggtggttgagttaccggcgctcccagccatttcacttcccctc
agcacgtcctccctgcccaccttcagcttcaacatggcgcctcccatctcctccccctca
gtcagctccacccccaaaaccatggctgttactcctgccaaggaaaacgtcttcaataag
gatccaccaaaggccttgacaccaccatgtgtaccttttacattttcctcccctattgtc
aaagccactgctgctagcccaccttctttttccacttctcctgaatttactttcagtgca
ccagtagcaaagttgggtccctcaatgtcaaatggaaacctcacctcacctatagcagga
ttagtgaagccacaaacaagcaagacaacagaggattttgaaggacctttcaaaccggcc
aagaccctgaagcagggcagtgtgctggatcttctcaagtcgcccggctttgcttctcct
gttgctcagacttccccaggctccaatgccactccccagccgacatcaccccaattcact
gcccctttgtccactacttcaacttcttcttcctcccgctcttcatcaatggagtctggt
attatgttcagagcctcagcaggcaagagctgtgataaatgctcagttcagaacaagcag
tctgacgctaagtgtgtttgttctgtggccccaaagcccacctcctcattcaattctctg
gacagtaaacaatcatccatcaactctgttgctttggagagtagcagcacaaacaccagc
tctgccactacaaccacaacaggatttggcacaatattttccaaaccttcaggaacttgg
gactgcgatacatgtcttgttgtgaacaaacccgatgcagtaaagtgtgtggcttgtgaa
accgccaaaccggggacagggctcaaaccttcactgacttttccctctccattttctgct
gataaaactatatctacgccaacacccccagtttccacaagtttcagtggatttggagac
aaattcaaaaaacctgagggtgcatgggagtgtgacacgtgtatggtgcagaacaaggca
ggggacacaaagtgtgtggcctgcatgactccaaaaccaggagctacagcggacacatca
tcatccagcagtgccccaatgtttggattgggagacaaattcaagaagccagagggagcc
tgggagtgtgacgtctgccttgtgcaaaataaggctagcgatgtacaatgtgttgcctgt
caaacagcaaaaccaggagcgagtgttgaacccaaggcctttggttcctttaattcctta
gctggcgggactccaggattgtctacctctacttcaggaggttttaagtttggcacaaca
gacagtacatcaggatcaggaggtttcaagagtggatcatcagcttgggagtcatcctca
actccgtcaggtggatttaaatttggaatcgcatctggaaactcctcatcagaatcttct
tctaaagacactactgcttcaccaggattcaaatttggtaattcctctggtggcttcaaa
tttggagccggtcctactgatgacaagaagtcagaccagtctgctgctgcaggttccagt
tttaagtttggagttggcggtggaatagtttttggaactggatcatcgagcacagaaggt
agctcttctaagggtggcttcaccttcggactttcaaaacctacagaagaagtaacagaa
accaccacatcctcttcatccactgtttctttcactcctccctcacaagaaaagagtgac
aatgccacatcatcaaatgacaccacagcaacaaatactaatgcacctaccaccacgact
acaacaacaggctctgtatttgatagattgggtgaacgaagtctgacgacaaacacacca
aaagtgagctctacatttggagcattacaagcagacaaggagccacctgctcccacattt
acatttggaaagccagaggaaaagaaggaagcagcttcctcaccagccccatcaaacttt
gtctttggtgctgctagtaaggatgcagattctgcacctgcacctgccgctttgggagga
ttttcctttggcaagtctggtggtccagcagaacaggctcaaacaggttttagttttagt
aaaccagcagaaaagactgaaccatctgcttcagaagccccaaagcccaccttcaacttt
ggacaaagtgctgcagattctcctgctgctcctaaaccatcatattctttcatggccaac
aatcctaccaccaacaccaccaccacctcatcatccccgatccccagtctgtttggcgct
ggcaccaacggcaacaacagcagcaccgccgcgccagctccggctgcggctcttgctgct
gcgcccagcgctttcattttcggccagccttctacggccaccagtgatgctgctccagct
aagacatttgtctttggccagaatcaagacaaccagccttctgccccatcaagtgcccct
ctgaacactgctcccgccccagcgccggctcagcccttcatcttcggcggtcctgctgct
cctgttgctcctgcggctcctgctgcagctgctccctcttttagctttggagccgcagca
accgctgctgcttctacatcagctacatctgcagctccttccccatttgcgttcagctca
gccccctctggtggttttggggccaaccaagctcctccttcatttggatcaccttttgga
tcccccttcacaggcacacctagtcagactccggcctttggggctaaatcaaatgctgca
cccgtttttggccaacagaccaactccacacccgcattcggagcaacatctagtgctgct
ccaagtggaggtttccagtttggaggggctagtgcatttggaaacgtaagcaacaacaac
acgggtgtgtttactttcggagggggacctgcagcctctcctgcccctcccgcccctcct
gccaatcccgctgtaactcttcagttgggaggagctggtgctggattcaacttttcacaa
cccccgacattcaacattgggtcagcgaaagctttcacttcttctccagctggacagcaa
acaatcgctgggcgcaagatcaagactgcagtgcggcgtagaaagtag
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integrated database retrieval system
