Cololabis saira (Pacific saury): 133461542
Help
Entry
133461542 CDS
T09849
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133461542 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133461542 (clasp2)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133461542 (clasp2)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
133461542 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
TOR1L1_N
RTP1_C1
Cnd1
ParcG
TAN
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
133461542
NCBI-ProteinID:
XP_061598521
LinkDB
All DBs
Position
15:12341189..12404157
Genome browser
AA seq
1533 aa
AA seq
DB search
MEDHDNMDYFYQQVLQKDVTRRLQVGQDLIDYLADPQRSADVEQDKSRLDKTIDELAGWV
NSSNFKVALVGIDICGAFVDRLGERFKGCLGTVLPALVDRLGDGKDQVRENSQALILRCM
EQAASPMYVWERLLPGFKHKNFRSREGICLCLSATLGTYGAQALSLSKLVPHLCSLTGDQ
NPQVREASITTLVDVYRYIGERVRADLGKRGLPAARLQTIFARFDEALNSGNMALSLSHD
RSFDDDDSVDGRSSSAQTAFKVPKVPKKPAESSTARRPSATGAKLVSKESGGIDEDDFIK
AFTDVPTVQIYSTRDLEDNLNKIREICSDDKHDWDQRANAMKKIRSLLVAGATSYDCFYQ
HLRLLDGAFKLSAKDLRSQVVREACITVAHLSSVLGNKFDHGAEAIVPVLFNLIPNCAKV
MATSGVSAIRIIIKHTHVPRLIPLITSNCTSKSVSVRRRCYDFLDLLLQEWQTHSLERHT
TVLVESIKKGIRDADSEARVEARKAYWGLRNHFPGEADALYNSLESSYQRTLQSCLKSSG
SVASLPQSDRSSSSSQESLNRPLSSKWPAAPGRVPVGSKGGVSMTSLQRSRSDVDVNAAA
VAKHRHVGQTRGAGRLPPGSYSSLDDASDKTDGTRSDNGRVRTKQPLTTASSVSSQVDAR
GRSRTKMVSQSQRSDESDCTPGSQSANPVGAGSRSGSPGRVLTTTALSTMSSGAHRVLGG
PAGDGRRRSRIPRSQGCSRDSSPTRLTVAPSSISSIYNGASRGARGSRIPRPSMSQGCSR
EASRESSRDTSPVRSFTPLATRSYSRSTGALHSSDAFGAAGSGFGISQSSHLSSSVSAMR
VLNTGSDVEEALADALLLGDMRSKKKPARRRYENYSMYSDDDANSDASSACSERSYSSRN
GGAIPTYMRQTEDVAEVLNRCASSNWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTR
MFADPHSKVFSMFLETLIDFILVHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALD
VTRESFPNDLQFTILMRFTVDQTQTPNHKVKAAILRYIETLTLQMEAPDFVNSSETRLAV
SRIITWTTEPKSSEVRKAAQSVLIALFQLNTPEFTMLLAALPKTFQDGATKLLQNHLKNT
GNVAQAPMGSPLTRHTPRSPASWSSPVTSPTNTSQNTPSPSAFDYDTENMNSEDIYSSLK
GVTEAIQNFSVRSQEDMNEPVQRREGEEGGSGTDGRVSDSMDGGRMALDNKTSLLNTPLL
TSSPRGAREYFTDSPFKQRSKDTTMDDSEHLTDDSSLDQSELVAELLKELSNHNERVEER
KGALCELLKLIRENTLQVWDEHFKTILLLLLETMGDREHVIRTLALRVLREILNKQPFRF
KNYAELTIMKALESHKDPHKEVVRAAEETAAMLALSISPDQCIKVLCPIIQSADYPINLA
AIKMQTKVVERIPREGLMSLLPEIVPGLIQGYDNSESSVRKACVFCLVAIYAIIGEDLKP
YLSQLSSSKLKLLNLYIKRAQSGSSASELSEGL
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccatgacaacatggactatttttaccagcaggtactgcagaaagacgtgacc
cgcaggctgcaggtcggccaggacctcatcgactacctggccgacccgcagcgctccgcg
gacgtggagcaggacaagtcccggctggacaagaccatcgacgagctggcgggatgggtc
aactccagcaatttcaaggtggcattggtagggatagacatctgcggtgcatttgtggat
cgcttgggagagcggttcaaaggatgccttggcacagtattgccagccctggtggacagg
ctgggtgacgggaaggaccaggtccgggagaacagccaagctctcatcctgcgatgcatg
gagcaggccgcttcacccatgtatgtttgggaacggctgctgcctggttttaaacacaaa
aatttccgcagcagagaaggaatctgcctatgtctcagcgccacactcggcacatatgga
gctcaggctctcagtctcagtaaattagttcctcatctctgctctttgactggagaccag
aacccacaggtacgcgaggcctccataacaacactggtggatgtttaccgttacatcgga
gagagggtcagagcagacctgggaaagagaggacttccagctgcgcggttacagactata
ttcgctcgttttgatgaagccttgaattcaggcaacatggctctcagcctgagtcacgat
cgtagttttgacgatgacgacagtgtggacggacgctcttcctcggctcagactgcgttt
aaagttccaaaagttcccaagaagcctgcagagtcttcaactgcccgccgacccagtgcc
actggtgccaagctagtgtccaaggaaagtgggggaattgacgaagatgacttcattaaa
gccttcacagatgtccccaccgtccagatctactccacgagggatcttgaggataacctt
aataagattcgggagatctgctcagatgataaacatgactgggaccagagagccaacgcg
atgaagaaaatccgttcactgttggtggcgggtgcaaccagctatgactgtttttaccag
caccttcgactactagacggagccttcaaactgtcagctaaagaccttcgctcacaagtg
gtccgagaggcctgtatcacagtggcccacctctcttcagttctggggaataaatttgac
catggagcagaggccatcgtccctgtcctgttcaacctcatccccaactgtgccaaagtc
atggccacctccggtgtatcggctatccgcatcattatcaagcacacccacgtacccagg
cttatccccctgattaccagtaattgcacatccaagtctgtgtctgtaagaaggcgctgt
tatgatttcttggaccttctgctacaagaatggcaaacccattctctagaaaggcatact
acagttttggtcgagagcataaaaaaaggaattcgagatgccgactcggaggccagagtt
gaagcccgcaaagcctactggggtctgaggaatcactttccaggagaagccgatgctctt
tacaactccttagagtcttcctaccagaggactctccagtcctgcctgaagagctctggc
agcgtggcctcccttccccaaagtgaccgctcctcatcgtcctctcaggagagcctaaat
cgtcccctgtcttccaaatggccggcagctccaggacgagtccccgtcggttctaagggt
ggggtgtcgatgacctccctgcagcgttcccgtagcgacgtggatgtaaacgcagcagca
gttgcaaagcaccgtcacgtgggacaaaccaggggagcgggtcgtctgccccctggctcc
tactcctctctggatgatgcctctgataaaacggatggaaccaggtcagacaatggccgt
gttcgtacaaagcagcccctgactacagccagcagcgtgtcgagccaggtggacgcgaga
ggccgcagccggaccaagatggtttcccagtcgcagcgttccgatgaatccgattgcaca
ccaggatctcagtctgctaaccctgttggtgctggaagtcggagtggctcccccggtcgt
gttctgacaacgacagcgttgagcaccatgagctctggtgcacaccgggtcctgggtgga
cctgccggggacggacgcaggcgcagccgcatcccccgcagccagggctgctccagggac
tcctcgcccactcgtctgactgtcgctccttctagcattagttccatctacaatggtgca
agcagaggagctcggggcagtcgtatccctcggcccagtatgagtcagggctgcagcaga
gaggccagcagggaaagcagccgggacaccagccctgtgcgctccttcacacctctcgct
acgcggagctactctcgctccaccggagctctccactcatctgatgcttttggggctgca
ggatcaggttttggcatcagtcagtctagtcatctttcttcttccgtcagtgccatgagg
gtccttaacaccggctccgatgttgaagaggctctcgcagatgcactgctgttgggagac
atgagatctaagaagaagccagcacggcggcgttatgagaactatagcatgtattcagat
gacgacgccaacagcgatgcatccagcgcctgttcagaacggtcctacagctcaaggaac
ggcggcgccatccccacctacatgagacagacggaagatgtggctgaggtgctcaaccgt
tgtgccagttccaactggtctgagaggaaggaggggctattgggtctgcaggctcttctc
aagaaccagcgcactcttagtcgggtagagttaaagcgtctgtgtgaaattttcaccagg
atgtttgcagaccctcatagtaaggtctttagtatgttcctggagacactgatagatttc
atcctggtccacaaagaggacctgcaggactggttatttgtcctactcacacaactgctg
aagaagatgggagcggacctgctgggatccgtacaggccaaagttcagagggctttggat
gttacgagagagtctttccctaatgacctccagtttactattcttatgaggtttactgtg
gaccagacgcagacgccaaaccataaggtgaaggcagctattctaaggtacatcgagaca
ctgacgctacagatggaagcaccagactttgtgaactccagtgaaactcggttggctgtt
tctcgcatcatcacttggacgactgaacccaagagctccgaagtcagaaaggcagcccag
tcggtgctcatcgccctgttccagctcaacaccccagagttcaccatgctgctggcagct
cttcccaaaacctttcaggacggagccaccaagctgcttcaaaatcatctgaagaacacg
gggaatgttgcacaggcaccaatgggcagccccctgacacgacacacccccagatctcca
gccagctggtccagtccagtcacttcacccaccaacacctcccagaacaccccctcacca
agtgcgtttgactatgatacagaaaacatgaactcggaggacatctacagctctctgaaa
ggtgtcacggaggcaattcagaacttcagcgttcgcagccaagaggacatgaatgaacca
gtgcaacgacgagaaggagaggaagggggcagcgggacagacggcagagtctcagactcc
atggacggcggccggatggctcttgacaacaagacttccctcctcaataccccgctgctg
acctccagcccccggggggccagagagtacttcactgactcccctttcaaacagagaagc
aaagacaccaccatggatgattcggagcatctcactgatgatagcagccttgaccaatcg
gagctcgtcgccgagctgctcaaggagttgtccaaccataacgagcgcgtagaggaaaga
aaaggagcgctgtgtgagctgttgaagttgatccgtgaaaacaccctgcaggtgtgggac
gaacacttcaagaccatcctgctgctcctgctggagacgatgggtgaccgagagcatgtg
atccggacattagctctgcgggtgctgagggagattctcaataagcagccttttcggttc
aagaattatgcagagctcaccatcatgaaggccttggagtctcacaaagaccctcacaaa
gaggtggtacgagcagcagaggagacagcagccatgctggcgttgtccatcagtccagac
cagtgtatcaaagtgttgtgtcccattatccagtcggctgattaccccatcaacctggct
gctattaagatgcagacgaaggtggtggagaggattcctcgtgaaggcctgatgagcctg
ctacctgagatagtgccaggactcatacagggctacgataactctgagagcagcgtgagg
aaagcctgtgtgttttgcctggtggccatctatgcgataataggagaggacctcaaaccg
tacctcagccaactttccagcagcaagctgaagctgttgaatctatacatcaagcgagcc
cagtctggctccagcgccagtgaactctctgaaggcctatag
DBGET
integrated database retrieval system
