Cololabis saira (Pacific saury): 133461544
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Entry
133461544 CDS
T09849
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
csai03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133461544
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133461544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133461544
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
133461544
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
133461544
NCBI-ProteinID:
XP_061598559
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All DBs
Position
2:28705645..28715333
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AA seq
446 aa
AA seq
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MAAARPAAGPGSSRDFYRDLDPSDEDLDKIAEANELYDAVLTGSVNQDKKTNDAASEKTS
TEDGKSTDEKTQSGGNSLKRLAVYIGNFPWWTSDKDLTTMALRLGVRDIKEIKFAENRAN
GQSRGYAEVVVTSQESLKILLEKIPHCRLDGEPIDCRFASRHNIAVFEEIANQRVPPRVN
GSPKETESEEKIPIALSSQESSFPPMPPPFPPLPHPSCFPSSPNPFLIQPPPLFPHMVPS
VPPPMPSHLFPPHPPPVSGQQISSLHINPAFFNPAQEGHSSKPYSQQRQTSQNTDADFEE
LMNRNRTIASSAISKAVSGATAGDLRMAMETLLTAIAIIKQSRVYGDECCRALVTSLKDC
LVSIQGDYSYKEKERDRDRGRDRDRDRLRERERDGERYRERNRDDFSGWKGGGTSRRHRE
RSWSEEREKERSREQERHRDHRDRYR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcccgacccgcagccggaccaggctcctccagagacttctacagggacctg
gaccccagcgacgaggatttggataaaattgctgaagcaaatgaactttatgatgctgtt
ctaactggttcagttaatcaagacaaaaagactaatgacgctgcttctgagaagacatct
acagaagacggtaaatcaactgatgagaaaacacagagcggaggaaactcacttaagaga
ctggctgtatatattggaaattttccttggtggacatctgacaaagacctcacaaccatg
gcgctgaggctgggtgtgagggacatcaaagaaattaagtttgctgagaacagagctaat
ggccagtcacgaggctatgcagaagtggtggtaacctcgcaggagtcactaaaaatattg
ttggaaaaaattccccactgtcgactcgatggagaaccaatagactgccgctttgcttca
cgccacaatattgctgtcttcgaggaaattgcaaatcagcgtgtacccccacgtgttaac
gggagtcccaaagaaactgaatcagaagaaaagattcccatagcattatcttcacaggag
tccagctttcctcctatgccgcctccttttccaccacttccacatccaagctgctttcct
tcatcacccaacccgtttcttattcagccacctccactttttccacacatggtgccatca
gttcctccgcccatgccatcgcatttgttcccacctcatcctcccccagtctcaggccag
caaatttccagtcttcacataaatcctgcatttttcaacccagctcaagaagggcacagc
agcaaaccgtacagtcaacaaaggcaaacatcacaaaatacagatgcagatttcgaggaa
ctaatgaacagaaataggactattgccagtagtgcgatctccaaggctgtgtctggagca
acagctggtgacctgcgcatggccatggaaacactattgacagctattgccatcattaag
cagtccagggtgtatggagacgaatgctgtcgagctctggtcacctcactcaaagactgt
ctggtctccatccagggcgattacagctacaaagaaaaagaaagagaccgggacagaggt
cgtgacagagaccgggaccggctgagggagcgagagagggatggagaacggtacagagaa
cgtaatcgagacgacttttccggctggaaaggtggaggaacatctcgaagacacagagaa
cgttcctggagtgaagagagggaaaaggagcgctcgcgcgaacaggaaaggcatagagat
caccgggaccgataccgctga
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