Cololabis saira (Pacific saury): 133461555
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Entry
133461555 CDS
T09849
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
csai
Cololabis saira (Pacific saury)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
133461555
NCBI-ProteinID:
XP_061598579
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All DBs
Position
15:12551552..12586401
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AA seq
1172 aa
AA seq
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MSSVCVLKRKAVLWQDSFSPHHRSTSPSMPVVLSSGGHAPPTGPIPQATPPSQQGGAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQWALYVQVRSMDELNHDFQALALEGR
AMGEQLLTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGG
GEVGVGSVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEDKREKPK
TFEGEKLKELTEGESDVINDVISDVINPNGLPVQNGLDVDVKEFGRPPGNMPAPGPESDL
LGGPGGVGAEGLTPLGGGGGPKPPEDFSGVEQGGVTMDPMESVMEPLQFDYNSQMPMDSQ
PTVGLFDYTNQQQLFQRNNALAVQQLTAAQQQQYALAAAQQPHIGLAPAFVPNPYIISAA
PPGTDPYAAGLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQATGQGQ
QNQQQVMRAGGNQRPLTPSQSQQGQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAA
YYDQTGALVVNTGARSGPVRLMAPASVIISPSAAQAVAAAAASAGGANGGLGGGANGPFR
AMTSQQQQQQGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSGQPGPGSASLGFSQPGSS
SLGATLGATLGGFGTAVANSSGGSGSRRDSLTGNTELYKRTPSSLTPIGHGGFYNSTLGF
SPSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRS
AASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRFPNLQLRDIAGHIMEF
SQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLA
LAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVV
QKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTE
QLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAER
AVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKY
TYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaagtacatctcccagcatgcctgtagtgctgagcagcggaggacatgccccc
ccaactggaccgattcctcaggccacaccccccagccagcagggtggagcaggggctgga
cgttcccaggatgatgccatggtagactatttcttccagcgacagcacggagaacagccc
ggcaaacaccgctggcccactggagacaacatccatgacagccagtgggctctctatgtg
caggtacggtccatggacgagctgaaccatgacttccaggctctggctttggagggacgt
gcgatgggagagcagctcctaactggtaagaagttctgggagacggacgactctgggaag
gatggaccaaaagggatattcctggaccagtggagggacagtgcgtggggcgcctcagat
cactctgtgtctcagccaatcatggtgtcccgtcggccggggcagggtttccatggcgga
ggagaagtgggggttggttcggtgatgtcaccacggtctgaaagtggggggctgggagtc
agcatggtggagtacgttctctcctcatcaccagcggacaaactggattcctgcctccga
aaaggaccatatggacagagggatggagaagtggaagaagataagagggagaagccaaaa
acgtttgagggagagaaactaaaagagttaacagaaggtgaatctgacgtcattaatgat
gtcatcagtgatgtcatcaacccgaatgggctgcctgtacagaacggcctggacgtcgac
gtgaaggagtttggtcgtcctccaggcaacatgcccgccccgggtcccgagagtgacctg
ctgggaggccccgggggtgtcggggccgagggcttgacacctctggggggcggcggaggc
cccaaacctcccgaggacttctctggtgttgaacaaggtggtgttaccatggaccccatg
gagtctgtgatggagccacttcagtttgactacaactctcagatgcccatggactctcaa
cccaccgtggggttgtttgattacaccaaccagcagcagctgtttcagagaaacaatgcc
ctcgccgtgcagcagttaacagcagcccagcaacagcagtacgcactggcagctgcacag
cagcctcacatcggtctggctccagcatttgtgcccaatccttacataatcagtgctgca
ccaccaggcacagacccctacgcggcaggactggcggcagcagctacacttggcccagcg
gtaatgcctccccagtactatggcgttacgccttggggggtctatccagccaaccttttc
cagcagcaggctgctgcagccaacaactcagccaatcagcaagcaacgggccagggccag
cagaaccaacagcaggtgatgcgtgctggaggaaaccagcgccctctgacccccagccag
agccagcaaggtcagcagaatgaccagctggtggcggcagcagcggtaaactcggctctt
gcctttgggcaggggttagcagccggggttcctgggtacccagtcttggcacctgcagcc
tattatgatcaaacgggggccctggtggtcaacactggagcccggagtgggcctgtccgc
cttatggcccccgcctccgtcattatatctccttctgcagcacaagcagtcgcggcagca
gcagcctctgcaggcggtgccaacggtggtttgggtggaggtgctaatggtccgtttcgt
gccatgacgtcccagcagcagcagcagcagggcggccctgggggtgcgctgggagggagc
tccttctatggatcttcgtccctcagctcttcatctcagagctcctcgcttttctcacag
ggctccggccagcccggaccagggtcggcctcactgggcttcagccagcccggctcatcc
tctctcggtgccactcttggagcaacgctaggaggttttggtactgcagtggccaactca
agtggtggcagtggttccaggcgagactctctcacaggcaacactgagctgtacaagcgc
acaccctccagcctcacacccattggccatggaggtttctataacagcacattgggcttc
agtccatctcctgggcctgtgggaatgcccctacccaaccagggaccatcccactccctc
acacccccaccctccctgtccaatcacagctcttcatccaacctcaatcttggaggcctg
accaatggcagtggccgtttcatctctgcagccccgggagcagaggccaagtaccgcagt
gccgccagctcaggctcctccctcttctcacccagcagccagctgttcccgtcatcacgg
ttacgctacgggatgtctgacgtgatgccttcaggccggagccgcctgctggaggacttc
aggaacaaccgcttccccaacctgcagctcagagacattgctggccacatcatggagttc
agccaggaccagcatggcagcaggtttatccagttgaaattagagcgagcgagttcagct
gagcgccagcttgtcttcagcgagattctgcaggcggcgtaccagctcatggtggacgtc
ttcggaaattacgtaatccagaaattctttgagtttggcagcctggaccagaagctggct
ttggctgagaggattcgaggccatgtgctgtctctagccctacagatgtatggctgcagg
gtcattcagaaagctctggagttcatcccctcagatcaacaagtcattagcgagatggtg
cgggaactggacggccatgtgttgaagtgtgtgaaggaccagaacggtaaccacgtggtg
cagaagtgtattgaatgtgtccagcctcatgcactgcacttcatcatcgaagccttcaag
ggacaggtcttcgccctctccactcacccatacggctgccgagtcatccagcgcattctt
gaacactgcctccccgaacagacgctgccgatactagaggagcttcatcaacacacagag
cagctagtgcaggaccagtatgggaactatgtgatccagcacgttttagagcacggacga
gccgaggataagagtaagatagtggcggagataagaggcaacgtactgggactcagccag
cacaagtttgccagcaacgtggtggagaagtgtgtgacccacgcgtcccgggcagaacgt
gcggtgctgatagacgaagtgtgcagcctgactgagggcccccacagtgccttatacacc
atgatgaaggaccagtacgccaactatgtggttcagaagatgattgacgtggcggagccg
acgcagaggaaaatcgtgatgcataagatccggccccacatctccaccctgaggaagtac
acgtacgggaaacacattctcgccaagctggagaagtactacatgaagaacggcgtggac
ctgggtcctctttgtggtcctcctaacggcattatgtaa
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