Cololabis saira (Pacific saury): 133461595
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Entry
133461595 CDS
T09849
Symbol
caprin1a
Name
(RefSeq) caprin-1a isoform X1
KO
K18743
caprin-1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133461595 (caprin1a)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133461595 (caprin1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
EC042_2821
BCL_N
Motif
Other DBs
NCBI-GeneID:
133461595
NCBI-ProteinID:
XP_061598662
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All DBs
Position
2:28876859..28889948
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AA seq
600 aa
AA seq
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MPSATVGNNAVQSAVPDLGNGSQSEAMKQILGVIEKKVRNMEKKKVKLDDYNAKKDKGET
LNQDQLDALSKYQEIFHNLDFARELQKNFLALGQEIQKAVKKSARREQLQREEMEQRRLK
TVLEIQYLLDQLGDEAVRQDLKRPDASGSSLLTDADLTSLDEFYKLVGPDRNYDIRLTNQ
YEEASLHLWDLLEGRDKAVAGTTYKLLKETLDKVLLSGYFDRPQSHQNGACEEEETQEEE
TALAETAVAGEQQSEPGNVQHIEGLPNENYTEPVKVETTEFVNRQFIPETTYSSPDKDQV
EEWSAEAQMVNSLQHQPSTQLAPEPAVTVNQAADPPTSDPVVRKQAVQDLMAQMQGTYNF
MQDSMLEFDGQALDPAIVSAQPMKLVKTVDLQQMGGPSIHSESRLSQTTAVSGPRESSPV
FNMNAPVPPPTDGHAEPLKQPSQFPSSYGQAFTSQSENTVEQPDIPQERLQSVVGGFQPQ
DQVLPSPGGHEDSSAGAGFGQSGQSFYNSRAAPRGGPRNARGMMNGYRGSSNGFRGGYEG
YRPPFSNAPPTAGYGQPQFNTSRDYSSSTYQREGYQQGYKRGAAQGPRGLSRGNTQAMRS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcaacagttggcaacaatgctgtccagtctgctgttccagacctgggaaat
ggaagtcaatctgaggctatgaagcaaattcttggtgttattgagaagaaggtccggaat
atggaaaagaagaaggtcaaattggatgactacaatgcaaaaaaggacaagggagaaact
ctgaatcaggatcaactggacgccttgtcaaagtatcaagagatcttccacaaccttgat
tttgcccgagaattacagaagaacttcctggcgttgggccaagagattcaaaaagcagtg
aagaagtctgcaagacgagagcagctgcagcgggaggagatggaacaacggcggctgaag
acggttttagagattcagtatttgctggaccaattgggagatgaagccgtcagacaggac
cttaaacgaccggatgcctctggctcctctctgctcactgatgctgacctcacatccctg
gacgagttttacaaattggtgggacctgataggaactacgacatcaggttgaccaaccaa
tatgaagaagcctcactgcacttgtgggatctgcttgagggccgagacaaagccgtggca
ggaaccacatacaaattgctgaaggagactttggacaaggtgctgctgagtggttacttt
gacagaccacagtctcatcagaatggggcatgtgaggaagaagagacacaagaggaagag
actgcactggctgagactgcagttgctggggagcagcagtcagaacctggtaacgtgcaa
cacatagaaggactccctaatgaaaactacactgagccagttaaagtggaaaccacagag
tttgttaacagacagttcattccagaaactacatacagtagtccagacaaagaccaagtg
gaggagtggtctgcagaggctcagatggtgaattccctccagcaccaaccctcaacacag
ctggctccagagccagccgtaactgtgaaccaagctgctgaccctcctaccagtgaccca
gtggtcagaaagcaggcagtccaagacctcatggcccagatgcaagggacatacaacttc
atgcaggactccatgttggagtttgatggacaggccctggacccggccatcgtgtctgcc
cagccaatgaagcttgtgaagactgtcgacctgcagcagatgggtggcccttcaatccac
tcagagtccaggctttctcagacaactgcagtgtctggaccacgagaatcctctccagta
tttaatatgaatgcgcctgtgcccccacccactgatggccatgcagaacccctgaagcag
cccagccagtttcccagcagctatggacaggcctttaccagccagtcagaaaatacagta
gagcagcctgacatcccacaggaacgattacagtcagttgttggtgggttccagccccaa
gatcaagtcctgccttcgccaggaggccatgaagattcctctgcaggtgcagggtttgga
cagtctggccagtccttttacaacagcagggctgcacccaggggtggacctagaaacgct
cgtggcatgatgaatggataccggggctcctcgaatggctttagagggggatatgaaggc
taccgtccacctttctcaaatgctcctcccaccgctggttatggccaaccccaattcaac
acatctcgggactattccagtagtacttaccagcgggagggatatcaacaaggctacaag
cggggagctgcccaaggacctcgaggtttgtcccgcggcaacactcaagcaatgcgatcc
taa
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