Cololabis saira (Pacific saury): 133461835
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Entry
133461835 CDS
T09849
Symbol
trim66
Name
(RefSeq) tripartite motif-containing protein 66
KO
K12032
tripartite motif-containing protein 66
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133461835 (trim66)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133461835 (trim66)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
133461835
NCBI-ProteinID:
XP_061598781
LinkDB
All DBs
Position
2:complement(29814114..29835509)
Genome browser
AA seq
1244 aa
AA seq
DB search
MEKICSECTEPTLAQSLCTLCNKWFCYQCTDLHQHQSVPATSHCPDSYQQQRPSAGQCAD
LHQRGSSSLPPAGQGSYPCSLLMCHSHRQEPLELFCESCDLLCCSSCHLSSHKNHRVVQI
GKALQDQQWLFESLMVQVEERRSAVENNAKQIEDRLHGVKIAHRKSENQIKMAKMIMMNE
LNKRANLLIEQLEKITEDFQQRLEDQLQGAIEICGQLDHIQKFITWATTHHCRGPVLFSR
ALISLQMQQLLEASFHSDSWSPVKIKFNWDASYWTKQISSLGQLTVEGGSCSYPSGLAYS
SIMRPQPIACLTLPSVVHRGREAGCGYQACCEPQMCCLHGIPPQADLSSLDKSQKETTHC
NSACTQPALISASLHQNQQLQRCWDAESSLQCPPPSSPVPIIGPIQLNCSRGSEPLPRSQ
SISYLSCHQHQREVLSDSHAQISAGRGRPGRLGPCKGKLSASTALQQELSHTVLDRDAMS
EESWEDRRSVEETCGRTAAAESRKLLDEELQLVRREQSPVRQQQLQAALAAEQPRTRPAL
MLKHHRDDQSSTSLELSATAHECASDVQSNRLSPGSVCTRRKRRSRSIPTELTAPSSSPY
AERPAGCTSSREQGDAKKYDIMDPRQRRASDGVLCVVKETSSQTTPLRGGFPPSLSYKME
PDHLPTFVTEEIDYGAKEKLKVSQRSFSSNGEVSKDSCRPRVPVVCLERLKILVSQLPPH
GRRQSDPLPASTADKSDTSAQQTTWRDATPEGRSGVSDTRRTARSLTTPPYGSQQTRQFT
TNLTNTDFHLHDDRGRLSSHKASAPPSTDSKYVPVSYSAVNLDSDSDPRSVSEDAMFSPV
DPQLDSDASPDSDPNAQSSSEAELECEVRRKLVPASEMDLCGDSEPSLEYDADPESDAGA
GSEDVQGLDAGAESGDGETESDTQPEYDPTFQAETDSDPLSEQHPDSQGSVESELDVESD
FELTTDDPQPLRSDLEEEPQDSPGHRPLLIANPMVHRGTEGAQPEQDSAEMDSEDFCAVC
LIGGELLCCDRCPKVFHLTCHVPPLLSFPSGDWLCSLCRNAVEPEVQYNCEGERTPGEHA
THGLSACDKRKCERLSLLILSNILSAPFHEPVSPLARHYYQIIKRPMDLSVIRAKLSKGN
PRHYSSPDEFVADVYLMFRNCAKFNYPDSEVAQAGRSLELFFTSKLKEVFPDRGFPMAEA
DSDSDEYDEAYRTAESGFLWPERREQCHGKRKRRQSLKSRRHHF
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatctgctcagagtgcaccgagccaacgcttgcacagagtctctgtacactc
tgcaacaagtggttttgttaccagtgcacagatttgcaccagcaccagagtgtccctgcc
acttcacactgcccagactcgtaccagcagcagaggcccagcgccggccagtgtgctgac
ctgcaccagcgaggctccagctcccttcctcctgcaggacaagggtcgtatccttgctcc
ctcctcatgtgccactctcacagacaggagcctttggagcttttttgtgagtcatgtgac
cttctgtgctgcagcagctgtcacctgtcctcccacaaaaaccacagggtggtgcagatc
gggaaggccctgcaggatcagcaatggctctttgagagcctgatggtgcaagtggaagag
aggagatctgctgtggagaacaatgctaaacagatagaagatagacttcatggagtaaag
atcgctcacagaaagtcagagaaccagattaaaatggcaaagatgattatgatgaacgag
cttaacaaacgagccaacctattaatagagcaactggagaagattacagaggactttcag
cagcgtctggaggaccagctgcaaggggcaatagagatatgtggccagctggaccacatt
cagaagttcatcacctgggccacgacccatcactgcagaggcccggtgctctttagcagg
gctctgatttccctccagatgcagcagctgcttgaggcgtctttccactcagactcttgg
agtcccgtcaaaatcaaatttaactgggatgcaagttactggacaaagcagatttcctcg
ttaggtcagctgactgtcgagggtggaagctgctcctatccttcaggcctggcctattcc
agtatcatgaggccccagcccatcgcctgcttgactctcccgtctgtggttcacagaggt
cgagaggcaggctgtgggtaccaggcctgctgcgagccacagatgtgttgcctgcatggc
atccccccccaggcagatctgtccagtctggacaaaagccagaaggaaaccactcattgt
aactctgcctgtactcagcctgctctgatttctgcatccctgcaccagaaccagcagctc
cagaggtgctgggacgcagagagctccttgcagtgtcctccaccttcatctcctgtccca
attattggaccaatccagctcaactgcagccgagggtctgagcccctaccgcgctctcag
tccatatcctatctgtcttgtcaccaacaccagagagaagttctttcagacagtcacgct
cagataagcgcaggccgcggcaggccgggccggctgggcccgtgtaaggggaagttgtca
gccagcacagctctgcaacaggagctcagccacacagtgttggacagagatgcgatgagt
gaagagagctgggaggacagacgcagtgtggaggagacttgtgggcgaacagcagcagct
gaaagcaggaagctgctggatgaggagctgcagctggtgaggagggagcagagtcctgtc
cgacagcagcagctccaagctgctctagcagcggagcagccgaggaccagacctgcactg
atgctcaaacaccacagagatgaccagagctccacatccctagagctgtctgcgacagcc
cacgagtgtgcatctgatgtgcagagcaacaggctcagccctggttcagtgtgcacaagg
aggaagagacgctcccgcagcatcccgacggagctgacagccccatccagcagcccgtac
gctgagcggcccgcgggatgcaccagtagcagagagcagggagatgcaaagaagtatgac
atcatggatcccagacagaggagagcatcagatggggttctgtgtgttgttaaggaaacc
tcatctcagacgaccccactcagaggaggcttcccaccctcactgtcctataagatggag
ccagatcatcttcccacttttgtaactgaagagattgattacggagctaaggagaaactc
aaagtttcacaacgcagcttcagcagtaacggagaagtttcaaaggattcgtgcagaccg
agggtcccggtggtttgcttagagcgtctgaaaatactcgtgtcgcagctgccaccacat
ggacggagacagagcgacccattgcctgccagcacggcggacaagtcggacaccagcgct
caacagacaacctggcgtgatgcaacaccagaggggagatcaggagtctctgacaccagg
aggactgcccgttcactcaccacgccgccgtatggaagccaacaaactcgtcaattcacc
acaaatttaactaacactgactttcacctccatgacgacagagggagacttagttcccat
aaagcatctgcgccgccatccactgactctaaatatgtacccgtaagttactctgcagtt
aatctggactctgactctgatcccaggtcagtgtcggaggatgctatgttttctccagtt
gacccacaattagattcagatgcgtcaccagactctgacccaaatgcacagtcgtcatct
gaggctgagcttgaatgtgaggttagaaggaaactggtacctgcaagtgagatggatctg
tgtggggattcagagccaagtcttgaatatgatgcagatccagaatcggatgcaggagca
ggatcggaggatgtccaaggactggatgccggagcagaatcgggtgatggtgaaaccgag
tctgacacccaacccgaatatgatccaacttttcaggctgagactgactcagatcctctg
tccgagcagcatccagactcacagggctctgtggagtctgagcttgacgtagaatccgac
ttcgaactgacgactgacgatccgcaaccgcttcgctctgaccttgaggaagagccccag
gacagtcctggtcacaggccgcttctgattgcaaaccccatggttcatagaggaactgag
ggggcccagccagagcaggacagtgctgagatggacagcgaggatttctgtgccgtgtgt
ctgattggaggggagctgctatgttgtgaccgttgtccaaaggtcttccacctgacttgc
catgttccgcctctgctgagtttcccctcgggggattggttgtgcagcctgtgcagaaat
gctgtcgagccagaagtgcagtacaactgtgagggtgaaagaacacctggagaacacgca
acgcacggactgtctgcatgtgacaagagaaaatgcgagcgactgagtcttctgatcctc
agcaacattttgagcgctcccttccacgaacccgtcagtccgcttgcacgccattactac
cagatcatcaagaggccaatggatctgtctgtgatcagagccaaactcagtaaggggaat
cccagacattatagctcgccagatgagtttgtcgctgacgtctatctcatgttccgaaac
tgtgcaaaatttaattatccggactctgaagtggcccaagcaggccgcagcctggagttg
ttcttcacctccaagctgaaagaggttttcccagacagaggtttcccaatggctgaggcg
gactctgatagcgatgagtacgatgaggcctacaggacggctgagagtggtttcctctgg
ccagagaggagggagcagtgccacgggaagaggaagaggagacagtcgctcaagtcgagg
cggcatcacttttaa
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