KEGG   Cololabis saira (Pacific saury): 133461891
Entry
133461891         CDS       T09849                                 
Name
(RefSeq) histone deacetylase 1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03082  ATP-dependent chromatin remodeling
csai03083  Polycomb repressive complex
csai04110  Cell cycle
csai04330  Notch signaling pathway
csai04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    133461891
   03083 Polycomb repressive complex
    133461891
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    133461891
   04350 TGF-beta signaling pathway
    133461891
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    133461891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csai03036]
    133461891
Enzymes [BR:csai01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     133461891
Chromosome and associated proteins [BR:csai03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     133461891
   HDAC complexes
    Sin3A-HDAC complex
     133461891
    BRAF-HDAC complex
     133461891
    REST complex
     133461891
    SHIP complex
     133461891
    MiDAC complex
     133461891
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     133461891
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    133461891
  Chromatin remodeling factors
   NuRD complex
    133461891
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 133461891
NCBI-ProteinID: XP_061598874
LinkDB
Position
16:complement(28743807..28756196)
AA seq 482 aa
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSGGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACEEE
FSDSEDEGEGGRRNTASFKKAKRVKTEGEKEVEEKEKKGEEETKEVKEEEKAPEEEKMDT
SK
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcttacttcacaaggaacgaagaaaaaagtttgctattactacgacggtgatgtt
ggaaattattactatggtcaaggccatcccatgaagccccaccggatccgcatgacccac
aacctgttgctcaactatgggctctacagaaagatggagatatatcgtccacacaaagcc
agcggagaggagatgaccaagtaccacagcgatgattacatcaagtttctgcgctcaatc
cgaccagacaacatgtcagagtacagcaaacagatgcagagatttaacgtgggagaggac
tgtccagtatttgatggtttatttgagttctgccagctctcggggggtggttctgttgct
ggtgctgtgaagttgaacaaacagcagacggatattgcaatcaactgggctggaggtctg
catcacgccaagaagtccgaggcctctgggttttgctatgtcaacgacattgtactggct
atcctggaattgttgaaataccaccagcgggttctgtacatcgatattgacatccatcat
ggagacggtgtggaggaggctttttacaccacggaccgtgtcatgaccgtgtccttccac
aagtatggcgagtacttcccaggcactggagaccttagggacattggtgctggcaagggt
aaatattatgctgtgaattatccactgagggatggaatcgatgatgaatcatatgaagcc
atatttaaacctattatggccaaggtgatggagatgtaccagcccagtgcagtggttctc
cagtgtggagctgattctctgtcaggagacaggcttggttgttttaacctcaccattaaa
ggccatgctaagtgtgtggagtacatgaagagcttcaacctgccacttttgatgcttggt
ggaggaggctacactatccgtaacgtggcgcgctgctggacatatgaaacagctgtggcc
ctcgatagctccatccctaatgagctcccgtacaatgactactttgagtacttcggacca
gacttcaagttgcacatcagcccctccaacatgactaatcagaacacaaatgactacctg
gagaagatcaagcagcgcctgtttgagaacctgcgaatgttgcctcacgcccccggagtt
cagatgcaagccatcccagaagatgctgtgcaggaggacagtggagatgaggaggaggag
gatcccaacaagcgcatatccatccgtgctcacgacaagaggatagcgtgtgaggaggaa
ttctctgactcagaagatgaaggtgaaggaggccgtagaaacacagccagcttcaagaaa
gccaaacgagtcaaaaccgaaggagagaaggaggttgaggaaaaggagaagaaaggtgag
gaggaaacaaaagaagtaaaagaagaggagaaggcaccagaggaggagaaaatggacaca
tctaaatga

DBGET integrated database retrieval system