KEGG   Cololabis saira (Pacific saury): 133461894
Entry
133461894         CDS       T09849                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
csai  Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:csai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csai04121]
    133461894 (hltf)
   03400 DNA repair and recombination proteins [BR:csai03400]
    133461894 (hltf)
Enzymes [BR:csai01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133461894 (hltf)
Ubiquitin system [BR:csai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133461894 (hltf)
DNA repair and recombination proteins [BR:csai03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    133461894 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 DEAD zf-RING_UBOX ResIII zf-RING_2 zf-RING_5 RING_XB3-XBAT31 Prok-RING_4 zf-Nse zf-ANAPC11 zf-rbx1 zf-C3HC4_4 zf-RING_4 HDA2-3
Other DBs
NCBI-GeneID: 133461894
NCBI-ProteinID: XP_061598880
LinkDB
Position
16:14739352..14763891
AA seq 958 aa
MFYRGWRFGWDPSSYVDLFSDRHEANAETLSQAIRAAASEEPDADGSVLFGQLRGTVVGL
RYYSGVVNFGEMVGLVREPQNPYDRNAVMVANIYGNQVGHIKKELAAAMAHVMDNNLAKV
EGVVYSGTKNTYTMPVMVSFWGKEENRDAVMKHLASRGYKLNADGSGIKGPNVKSYSFSG
AREFTSKKGVTIPLNAEELKNAFDNLFEGLMESKEGTKDAVKAVTTPLLPHQKQALSWMC
ARENKTALPPFWEKRGELYYNSVTCFSAKEIPERVRGGILADDMGLGKTLTTIALILTNF
HKGKPMPLETCEEQFSSTETKPQEASKQEDINKQAGASDTEADCYISESHKEELKVGSAD
ASEKSKMKGKRKPPKRKNEGPILLEDVDFAAALSGSSSDTGPKKKKPAGKVNPKPSAESS
ITENTDDLSARTTLIICPLSVLSNWLDQFEQHVQANVKLNIYLYYGSERNRNKKFLSSQD
VVITTYNVLSADFGNKSPLHGINWLRVVLDEGHVVRNPNAQMSKAVLELKAQRRWILSGT
PIQNSVKDLWMLLAFLRVKPFDVKEWWNRVIQRPTMQGDRDGLQNLQTLVKCITLRRTKS
SEVNGQRLVSLPEKTVFVEQVELSQQEREEYELARNEGRSTIGRYVAEGTVLRNYADVLA
ILMRLRQHCCHPDLLGKTSSDLGAAATPATPAELRERLIEKLRLVLASGSDEECSVCLES
VSLPVITHCAHVYCRPCIAQVISTEQIARCPLCRNEIKTSELVEFPEEDMEEYSGANSEK
WRTSSKVKALMGNLLRLRSEDGSIKSLVVSQFTRFLTVLETPLREQGFKFVRLDGTMNQK
NRTRVIKEFQSSAADGPAIMLLSLKAGGVGLNLTAASHVFLMDPAWNPATEEQCIDRCHR
LGQTKKVVVTKFIVKDSVEEKMVEIQKRKQDLVDKAFGSATTDKKTSRMDDIRALMEL
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgttttaccgcgggtggaggttcggttgggatccgtccagttacgtggatctcttctca
gaccgccacgaggcaaatgccgagactctctcccaggccatcagagctgcagcgtccgag
gagccggatgcagatggcagcgtgctgtttggccagctgcgaggcactgtggtcggcctc
agatactactcaggggtggtgaactttggggagatggtcggactagtgcgagagccccaa
aacccgtatgatcgcaacgcagtgatggttgcaaacatttatggcaaccaggtgggacac
attaagaaggagctggcagcagctatggcccacgtcatggataacaatctggctaaagtg
gaaggggttgtgtactcggggaccaaaaacacgtacaccatgccagtcatggtgtccttc
tgggggaaagaagagaacagagatgccgtgatgaaacacctggcaagtcgaggatataaa
ctgaacgcagatggaagtggaatcaaaggaccaaatgtgaagtcgtacagtttttcaggg
gcacgggaatttacatccaagaaaggtgttaccatcccactaaatgccgaggagctaaag
aatgcatttgataacctttttgaaggtttgatggagagtaaagaagggacgaaggatgca
gttaaggctgtgaccactcccctgctgcctcaccagaagcaagccctgtcctggatgtgt
gctcgagaaaataaaaccgcgctgcctccgttctgggagaagagaggcgagctgtactac
aacagtgtcacatgtttctctgccaaagaaataccggagagggtccgcggggggatcctg
gcagacgatatgggactgggtaaaactctgacaacaattgcactaatcctcaccaacttt
cacaaaggaaagcccatgcctttggagacatgtgaggagcagttttcctctactgaaact
aaacctcaggaggcctccaaacaggaagatataaataaacaagcaggagcgagtgataca
gaagctgattgttacatctcagaatcgcacaaggaggagctcaaggttggttcagcagat
gcgtccgaaaaaagtaaaatgaaagggaaaaggaaacccccaaagcggaaaaacgagggc
ccaattttgcttgaggatgtggactttgctgcggcgctgagtggctcatcatcagataca
ggcccaaagaagaagaaacctgctgggaaggtcaatcctaaaccaagtgctgaatcctcc
atcactgaaaacactgacgatttgtcggcgagaacaactcttatcatctgcccgctttct
gtcctcagcaactggctggaccagtttgagcagcatgttcaggccaacgtgaagctgaac
atctacctgtattacggttcagagcgcaacaggaacaagaagtttctgtcctctcaggac
gtggtgatcaccacgtacaacgtcctctctgccgacttcgggaataaaagtcccttgcat
gggatcaactggttgagggtggtgctggatgaaggacacgtcgtaaggaacccgaatgca
cagatgagtaaagccgtgcttgagctgaaagctcagagacgctggattctttcagggact
cctatccaaaacagcgtgaaggacttgtggatgctgctggccttcctgcgtgtgaagccc
ttcgacgtgaaagagtggtggaacagagtcatccaaaggcccaccatgcaaggagacaga
gacggcctgcaaaacctacagaccttggtgaagtgcatcaccctgcggcggaccaagagc
agtgaggtgaatggacagcggctggtgtcgctgcccgagaagacggtgtttgtggagcag
gtcgagctcagccagcaggagagggaggagtacgagctggcacgcaatgaaggaaggagt
accatcggcagatatgtcgctgaggggactgtcttgagaaattatgccgacgtgctcgcc
atcctgatgaggctgcgacagcactgctgccaccccgacctgctgggaaagacgtcctca
gatctaggcgctgcagcaacgccagcaacgccagcagagctgcgggagcgtctgatagaa
aagctgcgattggttctggccagcggctccgacgaggagtgctccgtgtgtctggaatcg
gtcagtctgcccgtcatcactcactgcgctcatgtttactgccgaccctgcatcgcccag
gtcatcagcaccgagcagatagcccgatgtcctctctgtcgaaatgaaatcaaaaccagt
gagctggtggagtttccagaggaggacatggaagaatacagtggtgcaaactctgagaag
tggaggacaagctcaaaggtaaaggcgctgatgggaaacctgctcaggctgcggtccgaa
gacggcagcattaagagtctggtcgtctctcagtttacgcgattcctcaccgtcctggaa
acgccgctcagagaacaggggttcaaatttgtgcgtctggacggcaccatgaaccagaaa
aacaggacccgggtcatcaaggagtttcagagttctgcagctgacggtcctgccatcatg
ctcctgtcactcaaagctggaggggtggggcttaacttgaccgctgcgtcacacgttttc
ctcatggaccctgcctggaacccagctaccgaggagcagtgtattgaccgctgccatcgc
ttgggccagacgaagaaagtcgttgtcacaaagttcatcgtgaaggactctgtggaagag
aagatggtggagatccagaagcggaagcaggacctggtggacaaagcgttcggctccgca
accacagacaagaagacatctcgcatggacgacatccgagctctgatggagctgtag

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