KEGG   Cololabis saira (Pacific saury): 133462011
Entry
133462011         CDS       T09849                                 
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04137  Mitophagy - animal
csai04140  Autophagy - animal
csai04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:csai00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    133462011 (hif1aa)
   04137 Mitophagy - animal
    133462011 (hif1aa)
   04148 Efferocytosis
    133462011 (hif1aa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csai03000]
    133462011 (hif1aa)
Transcription factors [BR:csai03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    133462011 (hif1aa)
SSDB
Motif
Pfam: bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD HIF-1 PAS PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 133462011
NCBI-ProteinID: XP_061599069
LinkDB
Position
16:complement(22348297..22369288)
AA seq 745 aa
MDTEIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYDLAKLLPLPHSVSSSLDKASIMR
LTISYLRMRKLLCTDEPIEGEETELDIQLNSSYLKALDGFFMVLSEDGDMIYISENVNKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLVHRTGSKKVKESNTERSFFLRMKCTLTSRGR
TVNVKSASWKVLHCSGHVQVNESQAENTTNCHSDPPVPYFVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIEEEKLVLSLEQTEDV
KPVKKEEQEVKEAVMESSQPSPVKEETCPELDVVKLFTQVVEPEPLISLFEKLKGKPEAL
TQLAPAAGDTIISLDFSCPEPDTHLLEEVPLYNDVMLPSTSDRLVMPLSPLPPSEPLQVS
NNPEESKSESFPPTPSTAPTTPSPPEADGPLDIFPIDSDMNSDFKLDLVEKLFAIDTESK
TTFSTQDLDLEMLAPYIPMDDDFQLQCISPEEPLSCEPVETPESSPVQGTQNIHDYSDSQ
FSAPSSQAASPTPPEPVSAPLLATIITQSTPQLEKEVPLKTLAAQNIQRKRKLNDLKELI
GQETLPQEEVEKGKKMKASESGTTKTIFLVPSDLASRLFGTTEASTSLFSLPQLTRYDCE
VNAPLQGRQYLLQGEELLRALDHVN
NT seq 2238 nt   +upstreamnt  +downstreamnt
atggacacagaaattgtacccgaaaagaaaagagtgagctcagagcggaggaaggagaaa
tcgagggatgcagcaagatgccgtcgtgggaaagagtcagaggtgttctacgatctggcc
aagctgctgcccctcccacacagcgtcagctccagcctggacaaggcctccatcatgagg
ctgaccatcagttacctgcgcatgagaaaactactctgcactgatgagccaattgaagga
gaggagacggagcttgatatccagctaaacagctcatacctaaaggccttggacggtttt
ttcatggtgctatctgaggatggggatatgatctatatctcagagaatgtcaacaagtgc
ctcggcctggcgcagtttgacctgactggacacagcgtgtttgatttcacacatccctgt
gaccaagaggagctcagggagatgctggtccacagaacaggctccaagaaagttaaggaa
tcaaatacagagcgcagcttctttctccgaatgaaatgcaccctcaccagcagaggtcgc
actgtcaatgtcaagtcagcttcgtggaaggtgcttcactgctctggtcacgtgcaggtt
aatgagagtcaagctgagaataccaccaattgtcacagtgacccccctgtcccctacttt
gttttgatctgtgaccccattccccacccctccaacatcgaggtcccactggacaccaag
acctttctcagccgccacacgatggacatgaagttcacatattgtgacgagaggatcact
gagctcatgggttatgatccagaggacctgttgaatcgttccgtgtatgagtactatcat
gctctggattcagaccatcttaccaagactcaccacaacttgtttgcaaagggtcaagtc
agcacaggccagtaccggatgttagcaaagagaggaggctttgtgtgggtggaaacacag
gccactgtcatctacaacaacaagaactcccagccacagtgtgtcgtctgtgtcaacttt
gtgctcagtggaatcgaggaagaaaaactcgtcttgtctctggagcagactgaggatgta
aagccagtaaagaaggaagagcaagaagtcaaggaggctgtaatggagagcagccagcct
tccccggtgaaggaagagacgtgcccagagctggatgtggtcaagctctttacacaggtg
gtagagcctgagccgctgattagcctgtttgaaaagctcaaggggaagccggaggccctc
acccagctggccccggcagctggagacacaatcatctccctggacttcagctgtcctgaa
ccggacacccacctgctggaggaagttcctctctacaatgatgtaatgcttccctccaca
agtgacagactggtcatgcctctgtcccctcttcctcccagcgagcccctacaggtctcc
aataacccggaggagtccaaatctgagagctttcctccaaccccctccactgcaccaacc
acccctagtcctccagaggctgacggtccacttgacatcttccctatcgattctgatatg
aactcagattttaaactagacttggtggagaagctgtttgccattgacaccgagtctaaa
accaccttcagcacacaggacttggatctggagatgttggctccctacatccccatggac
gatgacttccagctgcagtgcatcagcccagaagagcctctgtcatgtgaacccgtcgaa
acccccgaaagttctccagtccagggcacacagaacattcatgattattccgactctcag
ttcagcgcaccaagcagtcaggcggcttctcctacaccacctgaacctgtcagcgctcct
cttctggccaccatcattacacagagcaccccacagttggagaaagaagttcccttgaag
actctagcagctcagaacatacagcgcaaaagaaaactgaacgacctgaaggagttaatt
ggacaggaaacgctgcctcaggaagaagttgaaaagggcaaaaaaatgaaagcatcagaa
tccggaacaaccaagactatatttctagtgccttcagatttggcaagtcgattgtttggc
accacagaagcatccacttcccttttcagcctaccgcagctcacccgctacgactgcgag
gtcaacgcccctttacagggccgtcagtacctgctgcagggcgaggagctgctgcgtgct
ctggaccacgtcaactga

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