Cololabis saira (Pacific saury): 133462141
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Entry
133462141 CDS
T09849
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133462141 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csai01007
]
133462141 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csai03016
]
133462141 (kars1)
Enzymes [BR:
csai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
133462141 (kars1)
Amino acid related enzymes [BR:
csai01007
]
Aminoacyl-tRNA synthetase
Class II (A)
133462141 (kars1)
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133462141 (kars1)
Prokaryotic type
Other AARSs
133462141 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF3127
DUF374
Motif
Other DBs
NCBI-GeneID:
133462141
NCBI-ProteinID:
XP_061599267
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All DBs
Position
2:30889423..30904454
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AA seq
608 aa
AA seq
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MLCVVRAARHQLFQAFGVKGQWLKYPPPCTAAVPFQIHGNRWRGDKSELKRRLKADKKAA
EKEAKVTEQKKESNDQGAENACALDDETLDPNQYFKIRTQAIQDLKGTAEDPYPHKFHVD
LSLTDFIEKYSNLQPGDQLTDVTLNVSGRVHAKRASGAKLIFYDLRGEAVKLQVMANSRN
YKSEEDFIAINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGLKD
RETRYRQRYLDLILNDYVRQKFITRSKIITYLRSFLDKMGFLEIETPMMNIIPGGAVARP
FVTYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEVGRQFRNEGIDLTHNPEFTTCEFYM
AYADYHDLMDITEKLLSGMVKHITGGYKVTYHPDGPEGQACEIDFTPPFRRVSMTHDLEK
IMGVKFPPTDSYDSNETRKFFDELCLKKGVECPPPRTTARLLDKLVGDFLEVTCINPTFI
CDHPQIMSPLAKWHRTEKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAMAKAEG
DDEAMFIDDTFCTALEYGLPPTAGWGMGIDRLAMFLTDSNNIKEVLLFPAMKPDDNKTSA
PSEAAPAK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgtggtcagggcagccagacaccagcttttccaagcctttggtgtcaaggga
cagtggttaaaatacccacccccatgtacagctgcagtcccatttcaaattcatgggaac
cgttggagaggtgacaaaagtgagctgaagaggcggttgaaagctgacaagaaagccgct
gagaaagaagcaaaagtgacagagcaaaagaaagaatccaatgaccagggagcagaaaat
gcctgtgcactggatgatgagacgcttgaccccaatcaatacttcaagatccgcactcag
gctatccaggacctgaagggcacagcagaggacccatatccacacaagtttcatgtagac
ctgtcccttacagacttcattgaaaaatacagtaatctacagcccggggaccagctaaca
gatgtcactctcaatgtgtccggacgcgtccatgccaagagggcttctggtgccaagctg
attttctatgacttacgaggtgaagctgtcaagttgcaagtcatggcaaactcaaggaac
tacaagtctgaggaggatttcattgccatcaacaacaaactgcgtcgtggcgatatcatc
ggtgttcgtggaaacccagggaagaccaagaaaggggaattgagcatcattcctatcgag
atgacccttttgtcaccatgtttgcacatgttgccccacctccactttggtctgaaggac
agggaaacgcggtatcgccagcgttacctggacctgatactcaatgactatgtgaggcag
aagtttataacccgctccaaaatcatcacatatctccgcagcttcctggacaagatgggc
tttctggagatagagacaccaatgatgaatattattcctggcggagcggtggcccgaccg
tttgttacctaccacaacgagctggatatgaacctgtacatgaggatcgctcccgagctc
taccacaagatgctggtcgttggtggactagacagagtttatgaagttggccgtcagttc
aggaacgaaggcattgatctcactcataatccagagttcaccacctgcgaattctacatg
gcttatgccgattaccatgacttgatggatattactgagaaactgctgtcaggaatggtg
aagcacatcaccggggggtacaaggtgacttaccaccccgatggtccagagggacaggcc
tgtgagattgacttcactccaccgttcagaagagtgagcatgacacacgatctggagaaa
atcatgggagtcaaattcccccccactgacagctacgacagtaatgagacgcgcaaattc
tttgacgagttgtgtctcaaaaaaggagtggaatgtcctccacccaggaccactgctcgc
ctccttgacaagctggtcggagacttcctagaagttacatgtatcaacccgacattcatc
tgtgatcaccctcaaatcatgagccctttagctaaatggcaccgaacagagaagggcctc
acggagcgttttgagctctttgtgatgaagaaagaaatctgcaacgcttacacagagttg
aatgatccaatcagacagagggagctgttcgagcagcaagccatggccaaagctgagggt
gatgatgaagccatgttcatcgatgacaccttctgcacagcactagagtacggtctgcca
ccaaccgccgggtgggggatgggcatcgatcgtctcgccatgttcctgaccgactccaat
aacatcaaggaggtgttactgtttccagccatgaagcctgatgacaataagacaagtgct
ccctcagaggccgctcctgccaaatga
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