Cololabis saira (Pacific saury): 133462149
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Entry
133462149 CDS
T09849
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133462149 (msh4)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Meiosis-specific proteins
Others
133462149 (msh4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
AAA_28
AAA_23
Motif
Other DBs
NCBI-GeneID:
133462149
NCBI-ProteinID:
XP_061599274
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Position
16:23449326..23457034
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AA seq
890 aa
AA seq
DB search
MYHSSTDVAGGDTSDCGPSDSSSSANRRRATASPCPASTSSALSQQAAGQSLSSFRTGRT
AAALLASSSDSSSFRSHGGTPRLRRTPGSAGPTGTSCSSASTISGPSVIVAVVEGRGLAR
GEIGMASFNLNCPELVLSQFADTGTYAKVITKIHILVPVEILMPDTASDKGKGTKLFKLI
TENFPGVALTAIQRKYFNERKGLEYIQQLCAPEFGTVLMEIQAKYYCLAAAAALLKYLEF
LQNSVYAAKSLKVSFKGSEQTAMIDSASAANLELVVNNRDHRSEHTLLGVINHTKTPGGV
RRLRSNILEPLVDLETINMRLDAIQELLQDEELFFGLRNAIGHFLDIDRLLSVLVQIPKQ
ETVQAAESKITHVIQLKHTLDLVPRLRTVLKNCSTALLKAYSTTLEDDRFDVILNQVKTV
INDDTTYLKGSLNLRTQKCYAVRPNINEFLDIARRAYTEIVDDIAGLVNQMGEKYGLPLR
TSFSTARGFFIQMKLEGVNLAEGKLPSEFIKVTKYKNSYCFTTTDLMKMNGRCDEALREI
FHVSYVVICQLLSTIHEHIHCLYKLSDAVSMLDMLLSLANACTISDYVRPEFTDTLAIKQ
GRHPILERISRQQPISNNGYISEGSNFVIITGPNMSGKSTYLKQVALCQIMAQIGSFVPA
EYASFRVADQIFTRIGVDDDFETNSSSFMLEMKEISYIIHNASDRSLIIIDELGRGTSAE
EGIGICHSVCEFLLSLKAFTLFATHFLELCQLESLYPNVENQHMEVQHTRSRETGEERVV
YTYLLNRGCSQERHYGLRAAEMTALPPNVIQEAKTVASKVSQQLLARHHTDPETERQRAV
YHLATRLLQTARNSRLDPESLRTYLKGLKRQHEAELQATAPPMAVDTEEE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacagcagcacggatgtagctggcggcgacacctcggactgcgggccgagcgat
agctcgtcttcggccaaccggagacgagctaccgcctcaccgtgtccagcatcaacttct
tcagctttatcccaacaagcagcaggtcagagcctcagcagcttcaggacagggaggaca
gcagcagcgctgctcgcatccagctcagacagctcctcttttcgcagccatggagggacg
cccaggctcagaaggacaccggggtctgcggggcccacaggaacaagttgctcctctgca
tccacgatctctggtccctccgtgattgtagcagtggtggaggggcggggtttggccagg
ggggaaattggcatggctagtttcaacttgaattgtccagagcttgtgctttctcagttt
gcagacacggggacatatgccaaggttataaccaagattcacattttggtgccagtggaa
atactgatgccagacacagccagtgacaaggggaaggggacaaagctcttcaagctcatc
actgagaatttcccgggtgtcgctttaactgcgattcaaaggaagtattttaatgagagg
aaaggactggagtacattcagcaactatgtgctcctgaatttggcactgtcctcatggaa
atacaagcaaagtattattgcctggcagctgcagctgcgttgctgaaatacttagagttc
ctccagaactctgtttatgctgccaagtctcttaaagtgagctttaaagggagtgagcag
acggccatgatcgactcagcatctgccgctaacttggagcttgtggtcaacaacagagac
cacaggagtgaacatacacttttaggggtaatcaaccacacaaaaacacctggtggtgtt
agaaggctgcgctccaatattctggagccattggtggatttggaaaccatcaacatgcgc
ttggacgctatacaagagcttctgcaagatgaggagctcttcttcggcctcaggaatgct
ataggtcatttcctcgacatcgaccggctgctctctgttctcgtccaaatcccaaagcag
gaaacggttcaagcagctgaatccaagattacacatgttattcagctgaaacacacacta
gacctcgtaccgcggctaaggacggtgttaaagaactgcagcacagctctgctgaaggct
tacagtaccacgctggaggacgacaggtttgacgtgatcttaaaccaggtcaagacggtt
ataaacgacgacacaacataccttaaagggagtctaaacctgcgcacccagaagtgttat
gcggtgcgcccaaacatcaacgagtttcttgacattgcacgcagagcttacacggagatc
gtggatgacattgcaggacttgtgaaccagatgggggagaaatatggcctgccgttgcgc
accagcttcagcacagctcgaggcttctttatccaaatgaaacttgaaggagtgaactta
gctgaggggaaactcccctcagagttcatcaaggtaaccaagtacaaaaacagctactgt
ttcaccaccacagacctgatgaagatgaacggacgctgtgatgaggccctgagggagatc
tttcatgtgtcttatgtggtgatatgtcaactgctcagcaccatccatgagcacatccac
tgcctttataaactctctgatgctgtttccatgttggacatgttgctctctctggccaat
gcttgcacaatctcagactatgtgcgtccggagttcacggacactctggccatcaagcaa
ggccgtcatcccatcctggagcggatttctcgacagcagcccatatccaacaacggctac
atctccgagggcagcaactttgtcatcataacaggacccaacatgagcggcaaatccact
tacctcaaacaagtggcgctgtgtcagatcatggcccagatcggctcttttgttcctgct
gagtatgcctcttttcgagtagctgatcagattttcaccagaattggtgtggatgatgat
tttgaaaccaactcttctagctttatgttggaaatgaaggagatctcttacatcatccac
aatgcaagtgacagatcattgatcatcatagatgagttggggcgtggtaccagtgctgag
gaaggcattggcatctgtcactccgtttgtgagttcctccttagcctaaaggcgttcact
ctgtttgccacgcactttctggagctttgccaactggagtctctctatcctaatgtggag
aatcaacacatggaggttcagcacacgcgcagtcgtgaaactggtgaagagcgagtggtg
tatacttatttgctgaatcgaggatgctctcaagaaagacattatggtctgagagcagca
gaaatgaccgctcttcctccaaatgtaatccaggaggctaagacagttgcctctaaagtc
agccaacagcttttggccagacatcacactgatccagagactgagagacagagagctgtg
taccacctggccactcgcctcttgcagactgccagaaactcaagattagacccagaaagc
ctgcgtacgtacctgaaaggactgaaaagacaacatgaggctgagctgcaggctacagcg
cccccaatggctgttgacacagaggaggaatga
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