Cololabis saira (Pacific saury): 133462191
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Entry
133462191 CDS
T09849
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04517
IgSF CAM signaling
csai04519
Cadherin signaling
csai04520
Adherens junction
csai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133462191
04519 Cadherin signaling
133462191
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133462191
04530 Tight junction
133462191
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Paralog
GFIT
Motif
Pfam:
AFDN
DIL
PDZ
RA
PDZ_6
PDZ_2
RA_3
Motif
Other DBs
NCBI-GeneID:
133462191
NCBI-ProteinID:
XP_061599316
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Position
16
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AA seq
1073 aa
AA seq
DB search
MPETDGREKLSKVISQWNNERLDLFEISRPDENLEFHGVIRFCLEDRYHGNVATKCLRVS
SGAPTREVIEVLWEKFRPDMKMLTTSYSLYEVHASKERKLGPDERPLLVQLSWTSGNRDG
RFVLKRDEDGLEMKESCQEREKVGVIQSFKRTLSRKGKKKEKNNNAEDESGPCDLSGSET
PGLPVGIQFSDEAEDNFLSAVVNYTNSSTVHFKLSPAYALYAAAHFALRRHGNAASVTSI
TDKMVAATGKVIQKQRAVAGALAFWTANSSELLNFLKHDEELGPLTRQSQRELSHLVHKA
YSLLLHRQQTELSKHLPTFLIDPEEHGALPPGLELVLNTLMTTMALLRRCRVNAAFTIQL
FSQLFHFTSTWLFNRLVGRDGAAPPGLRSHYWGAALRRRLSAMEGWAERQGLELAADCHL
GRIVQATTLLTMKKYSVRDAKDIQSSCFKLNSLQLQMLLAGYVHAADEPRIPPDLIDAVV
TAAESSVDHLIRGEGRDVRLQESPELRLPFLLPEGGYSCDAARGVPPGFEEFLEPLRQKG
LCSLTRHPDSNLAWTVHFSEPAASDEGTYLAARRQPDTETVTLHKPPDSGMGVSIVAAKG
AGQSDLGIYIKSIVRGGPAETDGRLDAGDQLLSVDGRSLVGLNQDRAAAIMMRTGPVVTL
QVVKSGASYHGLEALLGEDGDRLKEGDGASTLYCVVDLGNKRSRQLYRSDPNVADFRPED
GDGRVDPGVEGNGATSASSVDLGADTLRREYLTLPNPKSRDKSVSEAGRTQRTLKTSRTP
SDRTFLRQALSQEDLSVEGRRPLLAAQHAPGLYSSFPLRPSASAHDVLSDSPARTTAAGL
WRTPFSQQATPTPSVQPVRIDIPLTRAGPSPPNPPLTTFQQSHAPQRRAPPTYACPVSAA
TKPSISPVKHVSFQQETSAVTARPSPRELGDPWRREAREQLEKRRALQAVERLGREMAAL
QAKARRSAEESGRLRRLSLEWQFQKRLREEQQDGEEEEEDEVVVQQPADRASPMESKSGN
AREEDEANAGETSIGRKNGVRDAPSSEIRRRKMAPEKLPFSERQRLFSLPSSA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccggagacggacggacgagagaaattgtccaaagtcatcagtcagtggaacaacgag
agactggacctgtttgaaatcagccgaccggacgagaacctggagttccacggcgtgatc
cgcttctgcctggaggatcgttaccacggcaacgtggccaccaagtgtttgcgcgtgagc
agcggcgctccgacccgagaggtcatcgaggttctctgggagaagttcaggcccgacatg
aagatgctgacgacgagttactcgctctacgaggtccacgccagcaaagagcgtaagctg
ggtccggacgagaggcctctgctcgtgcagctgagctggacgtctggcaacagagacgga
cgctttgtgctgaagagagacgaggacggtttggagatgaaggagagctgccaggaacga
gagaaagtgggcgtcatccaaagcttcaagaggacgctatcgcgcaaaggaaagaagaag
gagaagaacaacaacgccgaggacgagagcggaccatgtgacctgtccggctccgagact
cccgggttgccggttgggatccagttctctgacgaagccgaggacaacttcctgtccgcc
gtggtgaactacaccaacagctccaccgtccacttcaaactatcgcccgcctacgccctc
tacgccgccgcccacttcgccctgcggcgccacggcaacgcggctagcgtgacctcaatc
acggacaagatggtggccgcgacggggaaggtcatccagaagcagcgcgccgtcgccggg
gctctcgccttctggaccgctaactcctccgagctgctcaacttcctcaaacacgacgaa
gagctcggcccgctgacgcggcagagtcagcgggagctttcccacctggtgcacaaggcc
tacagcctgctgctgcaccgccaacagaccgagttaagcaaacatttaccgacgttcctg
attgaccctgaagagcacggagccctgccgcccggtttagagctggtgctcaacaccctg
atgacgaccatggcgctgctgcgccgctgccgggtcaacgcggccttcaccatccagctc
ttctcccagctcttccacttcaccagcacgtggctcttcaaccggctggtgggccgggac
ggcgccgccccgccgggcctgcgctcccactactggggcgccgcgctccggcgccggctc
agcgccatggagggctgggcggagcggcagggcctggagctcgccgcagactgccacctg
ggacgcatcgtgcaggcaaccactctcctgaccatgaagaagtactcggtgcgggacgcc
aaggacatccagagttcctgcttcaagctgaactcgctgcagctgcagatgctgctggcg
ggatacgttcacgccgccgacgagccccgcatcccccctgacctgatcgatgctgtggtg
acggcggccgagagctcagtggatcatctgattcggggcgaaggacgggacgtccgtctg
caggagagcccggagctccgcctgcccttcctgctgccggagggcgggtactcctgcgac
gccgccagaggagtcccgccagggttcgaggagttcctggagccccttcgacaaaaaggt
ctctgctcgttgacgcgtcacccggactccaacctcgcctggacggtgcacttcagtgag
ccggcagcgtcggatgaaggaacctacctggccgctcgccgacagcccgacacagagacg
gtcacgcttcacaaacctccggacagcgggatgggagtcagcatcgtagccgccaaggga
gccgggcagagcgacctcgggatctatatcaagtccatcgtgcgaggaggaccggcggag
acggacgggaggttggacgccggagaccagctgctcagcgtggacggccgaagtctcgtt
ggactcaaccaagacagggcggcggccatcatgatgcggaccggccccgtggtgacatta
caggtcgtcaagtccggcgcgagctaccacggcctggaggcgctgctgggcgaggacgga
gatcgtctcaaggaaggtgacggagcgtcaacgttgtactgcgtcgtcgacctcggcaac
aagcggagccgacaactgtaccgctccgaccccaacgtggcggactttcgcccggaggac
ggagacggacgcgtcgaccccggcgtggagggaaacggcgccacttctgcctccagcgtc
gacctcggcgccgatacgctccgcagggaatacttgaccctcccgaaccctaaatcccgg
gacaagtccgtctctgaggccggacggactcaacgaaccctcaaaacgtctcggacgcct
tcggaccggaccttcctgcgtcaggccctctctcaggaggacctgagcgtggaggggcgg
cgccccctgctggcggcccagcatgcaccggggctctactcgtccttcccgctccgcccg
agcgcctcggcccacgacgtcctctctgactctcccgccagaacgacggccgccggcctg
tggaggacgccgttctcccagcaggccacgcccacgccgtccgtccagcccgtacgcatc
gacatccccctcacccgggcggggccctccccccccaaccccccgctcaccaccttccag
cagagccacgccccccagcgccgagccccgcccacttacgcctgccccgtatccgcggcg
acgaagccgagcatctcgccggtgaagcacgtttccttccagcaggagacgagcgccgtg
acggcgaggccgagccctcgggagctgggcgacccctggaggcgggaggcccgggagcag
ctggagaagcggcgagcgctgcaggccgtggagcgtttggggcgcgagatggcggcgctg
caggccaaggcccggcgctcggcggaggagagcggccggctgaggaggctcagcctggag
tggcagttccagaagaggctgcgggaggagcagcaggacggagaggaggaggaggaggac
gaggtggtcgtccagcagccggcggacagagcgtctccgatggagagcaagagtgggaac
gccagggaggaggacgaagccaacgctggtgaaacatcgattggacggaagaacggcgtc
cgtgacgcaccatcaagcgagatccggaggaggaagatggcgcctgaaaagctcccgttc
agcgagcgccagcggcttttctctctgccgtccagtgcgtga
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