Cololabis saira (Pacific saury): 133462258
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Entry
133462258 CDS
T09849
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133462258 (sox11a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133462258 (sox11a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NADH_Oxid_Nqo15
Motif
Other DBs
NCBI-GeneID:
133462258
NCBI-ProteinID:
XP_061599386
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Position
16:20848404..20851391
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AA seq
368 aa
AA seq
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MVQHTDTSETDGSMSREATDSEESEFMACSPVPINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDTSKSSAAAPSPEKCGKMAKTPSSSKKCSKIKTKSGSKSSHHGYAEDCVFPSLKVAK
TVKSELTDEDDEDDYEEDYRTGIKAGEEERLRPYGVAKVPASPTLSSSAESEGTSMYEEV
RSNNRLFYNIKNISKQSALHAASVSPASSRSVSTSSSSSSSSSGSSSGEDADDLLFDFSL
NFAPSAPELGNPNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEAN
FSDLVFTY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacacggacaccagcgagacggatgggagcatgtccagggaggccacggac
tcggaggagagtgaatttatggcatgcagccccgtgccgatcaacccggactggtgcaag
acggccaccggccacatcaagaggcccatgaacgcgttcatggtctggtccaagatcgag
aggagaaagatcatggagcagtcgccggacatgcacaacgcggagatctccaagcgcctc
gggaagaggtggaagatgctcaaggacagcgaaaagatcccgtttatccgggaagccgag
agactgcggctaaaacacatggccgactaccccgactacaaatacagacccaagaaaaaa
ccaaagctcgacacttccaagtcatcggcggcagcaccgtctccggagaagtgcggaaaa
atggcaaagactcccagcagcagcaagaagtgctccaagatcaagaccaagagcggctcc
aagtcctctcatcacggctacgcggaggactgcgtgtttcccagcttaaaagttgcaaag
actgtgaaaagtgagctcaccgacgaggacgacgaggacgactacgaggaggactaccgg
acggggattaaagccggggaggaggagcgcctgaggccgtacggtgtagccaaagttccc
gcgagcccaactttgagctcctcggcggagtccgaggggacgagcatgtatgaagaagtg
aggagcaacaacagactcttttacaatatcaaaaacatttcgaagcagagtgcgttgcac
gctgcttctgtctcaccagcatcctccaggtctgtctccacatcctcctcttcctcctcc
tccagcagcggctcctcttctggggaggacgcggacgatttgctgtttgactttagtttg
aatttcgctcccagcgccccggagctggggaaccccaattcaggaaacctctccctgtct
cttgtggataaggacctggactctttcagcgagggcagcctgggctcccactttgaattc
ccagactactgcacgccagaactcagtgagatgattgccggggactggctggaggcgaac
ttttccgacctggtcttcacatactga
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