Cololabis saira (Pacific saury): 133462269
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Entry
133462269 CDS
T09849
Symbol
rbm25a
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133462269 (rbm25a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133462269 (rbm25a)
Spliceosome [BR:
csai03041
]
Complex A
U1 snRNP components
U1 related factors
133462269 (rbm25a)
Complex B
133462269 (rbm25a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
133462269
NCBI-ProteinID:
XP_061599401
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All DBs
Position
16:complement(35460015..35493485)
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AA seq
884 aa
AA seq
DB search
MSYPPPMNRPQMGLPQLPPRIPPPQFGGFAPPVPPGTPMIPVHMGVVSPAPTVLVPTSVS
VVQKPMLLKKEPGGLRVKDDDSGGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRVQ
GASGKLQAFGFCEYKEPESTLRALRLLHELLLGDKKLLVKVDAKTKAQLDEWKAKKRSSN
GETTDGSKDEDEEEVLDEDTLRRDQVAKGAIDVLIREYASELNAPSQDPDSQPRNKKRKE
KKEEEDINAMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEKERLELERERRERDKERE
RERERRDREKEKERERERDKERERDRDRERERERERERTKERERERERERTKERERSLDT
SEARSRSRERTRDDKKRDRDEDEEDVYERRRLERRLRDKEAAYQERLKNWEIRERKKTRD
YNKENEREEERRREMMKEAKRLKEFLEDYDDDRDDPKYYSPPLLVLRGSAFQKRLRDREK
EIELDERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEEEAERKRQPPLKLDSEETASQ
EKAHRDRDRDRERDRERDRDRDRERERERDRERERERERERERERDRERERERERDRERE
KRGSERPIEPAPPVPPQHSDDDVEEGEDDDYHDHEDLPEVKPQPKPVMRPITTAPSVSSA
SGNATPNTPGNDSPCGIIIPGENTPDLAPLEEHRPKIGLSLKLGATNSPSQLSAGKRKKL
AAVDSVFNKFDDDEADEQPRKRKLVPLDYGDDDKSLGLDGADISAAKGSINSEEKRKHIK
SLIEKIPTGRPELFSYPLDWAMVDSILMDRRIRPWINKKIIEYIGEEEPTLVDFVCSKVM
AHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccccctcccatgaaccggcctcagatgggcctcccccagctgccccccagg
ataccccccccacagttcggaggcttcgccccgcctgtcccgccaggtactcccatgatc
ccggtccatatgggcgtagtgtctcctgctcccacagtcctggtcccgacctccgtctcc
gtagtgcagaagcccatgctgttgaagaaggagcccgggggcctcagggtcaaggacgac
gacagcgggggccccaccaccaccgtgttcgtggggaacatctctgaaaaggcgtcggac
atgttggtccggcagcttctagcgaaatgtggtattgttctcagctggaagagagtccaa
ggcgcctctgggaagcttcaagcgtttgggttctgtgagtacaaggaacccgagtccacc
ctgcgggccctgcgactgctgcatgagctgctgctcggggacaagaagctgctggtgaaa
gtggacgccaagaccaaggcccagctggacgagtggaaggccaagaagaggagctccaac
ggggaaaccactgacgggtctaaagatgaagacgaggaggaggttctggacgaggacacc
ctgcgtcgggaccaggtggccaagggtgcgatcgacgtcctgatccgagagtacgctagc
gagctcaacgcgccgtcgcaggaccctgacagtcagccgcgcaacaagaaacgcaaagag
aagaaggaggaggaggatatcaatgccatggagatggaagatgacaagcgagacctgata
tccagagagatcagtaaattcagggacacgcacaagaaactggaggaggagaaagggaag
aaggagaaggagcgtctggagctggagagggagcggcgggagcgcgacaaggagcgcgag
cgcgagagggagcgccgcgaccgcgagaaggagaaggagcgggagagggagcgggacaag
gagcgggagagggaccgcgaccgggaacgagagcgggagcgggaacgagagaggacaaag
gagagggagagggagagagagagggagaggacgaaagagcgggagaggagtctggacacc
agcgaagctcgcagcaggtccagggaaaggactcgagatgataaaaaacgagaccgcgat
gaggacgaggaagacgtgtacgagcgacggagactggagcggaggctgagagacaaggag
gccgcttaccaagaacgcctgaaaaactgggagatcagagagaggaagaaaacccgcgac
tacaataaagaaaacgagagggaggaggagcggaggcgtgagatgatgaaagaagccaag
cggctgaaagagttcctggaggactacgacgacgacagagacgaccccaaatactacagc
cctcctctcctcgtcctcaggggcagcgcctttcagaagcggctccgcgaccgcgagaag
gagatcgagctggacgagcgggacaggaagagggagaaggaggagctggaggagatcaga
cagagactgctggccgagggccaccccgaccccgacgccgagctgcagaggatggaggag
gaggcggagcgtaagcggcagccccccctgaagctggattcagaggagaccgccagccag
gaaaaagctcacagggatcgggatcgagaccgggagcgagatcgggagcgagaccgagac
cgggaccgggaacgggaaagagagcgggaccgggagcgcgaacgagagcgtgaacgggag
cgcgagcgggaacgggaccgggagcgtgagcgcgagcgggaacgggaccgggaacgagag
aagaggggctccgagaggccgatcgagccggcgccgcccgtccccccgcagcactcggac
gacgacgtggaggagggcgaggacgacgactaccacgaccacgaggacctgccggaggtc
aagccgcagcccaaacccgtcatgcgaccgatcaccacggccccctcggtgtcctcggcc
agcggcaacgccacgcccaacacgcccggcaacgactcgccctgcggcatcatcattccc
ggggaaaacactcctgacctggcgccgctggaggagcaccggcccaagatcggcctcagc
ctcaagctaggcgccaccaacagtcccagtcagctcagcgccgggaagcggaagaagctc
gccgccgtggacagcgttttcaacaagtttgacgacgacgaggccgacgagcagccgcgt
aaacggaagctggtgccgctggactacggcgacgacgacaagagcctggggctcgacggg
gccgacatctccgccgccaaaggcagcatcaactcggaggagaagcgcaagcacataaag
agcctgatcgagaagatccccacgggccggccggagctcttctcctaccccctggactgg
gccatggtggactcgattctgatggatcggcgcatcaggccatggatcaataagaagatt
attgaatacatcggggaggaggaacccacgctggttgactttgtctgttctaaggtaatg
gcacacagcacccctcagggcattctagacgacgtcgcaatggtccttgatgaagaggca
gaagtcttcatcgtaaaaatgtggaggctgttgatatatgaaacagaagccaagaagatc
ggattggtcaagtag
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