Cololabis saira (Pacific saury): 133462324
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Entry
133462324 CDS
T09849
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133462324 (pnn)
03015 mRNA surveillance pathway
133462324 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133462324 (pnn)
03041 Spliceosome [BR:
csai03041
]
133462324 (pnn)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133462324 (pnn)
Spliceosome [BR:
csai03041
]
Complex C
Other components
EJC/TREX
133462324 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Toxin_trans
Motif
Other DBs
NCBI-GeneID:
133462324
NCBI-ProteinID:
XP_061599513
LinkDB
All DBs
Position
16:32516305..32523089
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AA seq
697 aa
AA seq
DB search
MAVAVRSLQDQLEKAKEGLKNVDDNIRKLTGRDPNDSRPGQFRRLSGPMAGVGGGGPGGG
GGGGMGMGGRGRGLNLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDMRHDSDAE
DDDDVKKPALQSSVVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNV
STEKQKRRTEIEQKLEVQAEAEKKKVESEKRELFEERRAKQTELRLLEQKVELAQLQEEW
TSHNNYLVKFIRTKTKPHIFFVPGKMCSASQKLLEESTKKLNGVFEERREAFTEHLSKME
LRPRRQLNRDQDINTATRTDHPAEGKPAGQVAKMTGKRSLAGMEGEDEDEDDEEEEREKE
EDKKMTEGEDGEEKEKEEMKKIEEEDEEEGMELREEGEEKKQKEKEQKEKEQKEKGDKEA
GPESEEMQVEQGVEMEEKNKEDNAETGSKQGSTDLPEEKAVDGRTVTSEAATGSQEASGT
SITSLKAEPSLTVPEPAVQSPVKEPSPAKEPQTASSTLKQEPTGPVCNVQDSVVENQITE
AKPAEEAPQKPLNSQEAPVTTPAKEANASRGRKKEKQRKRRSNSSSSSSSGSSSGSSSSG
SSSSSSGSSHSSSSSSSSSSKSSSRSRNRDAGKRKRRASDRSRDKKKEDKSHRKRGGSSG
GGRDSKGSRKRRSEEGRGRSSRSDREHKDRDRKDKRR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgaagtctgcaggaccagctcgagaaagccaaggaaggcttgaaa
aacgtggacgataatattcgtaaattgacaggacgcgaccccaatgactcaaggccggga
cagttccgtcggctcagcggccccatggcaggcgtcggaggaggaggaccaggaggagga
ggaggaggagggatggggatgggaggtagaggcagaggactcaacctgctcaggcgcagt
ctctcagacatgggaagcggcggcccccctgccaagcagagagacattgaaggagccctg
ctgaggctggcaggggaccaaagggccaggagagacatgcgccacgacagcgacgccgag
gatgatgacgatgtcaaaaagccggcgttgcagtcgtctgttgtagctacctccaaggag
cgaacgcgccgagatctcattcaagatcaaaccatggatgagaagggcaaacagagaaat
cggcgcatgtttggtctgctgatggggacgctgcaaaaattcaaacaggaatccaacgtc
tctacagaaaagcaaaagcgacgtacagagatagagcagaagctcgaggttcaggccgag
gctgaaaagaaaaaagtggagagtgaaaagagggagttgtttgaagagaggagagccaag
cagacagagctgagactactggaacagaaagtggaattggctcagctgcaagaggagtgg
accagccacaacaactatctggtgaaattcatccgtacaaagactaagcctcacatcttc
ttcgtaccaggaaaaatgtgctccgcatcacaaaaactcctcgaagagtccactaagaaa
cttaatggcgtttttgaagaaaggcgcgaggcatttactgaacacctgagcaagatggag
ttgcgccctcggcgacagctcaaccgcgaccaggacatcaacacagccacaaggacggac
catccggcggagggtaagccagcaggtcaggtagcgaagatgacaggtaaaaggagtctt
gcagggatggaaggagaggatgaggacgaggatgacgaagaggaggaaagggagaaggag
gaggataaaaagatgacagagggagaggatggggaggagaaggagaaggaagagatgaag
aagatagaggaggaggatgaggaggagggaatggagttgagagaggagggagaggagaag
aagcagaaggagaaggagcagaaggagaaggagcagaaggagaagggagataaggaagca
ggtccagagtcagaggagatgcaggtggagcagggagtagaaatggaagagaagaataag
gaagataatgcagaaacaggcagtaagcaaggatccacagacctcccagaggaaaaggct
gtagacggcaggacagtaacctctgaagcagctacaggcagtcaggaagcatcaggcact
agcatcactagtcttaaggccgagcccagcctcactgttccagaaccagccgtgcagtct
ccggtgaaagagccctctcctgctaaagaaccccaaacagcctccagcacccttaaacag
gagcccacaggccccgtatgtaatgtccaggattctgttgtcgagaaccaaataacggaa
gctaagccagcagaggaggctccacaaaaaccgctcaattcccaggaagcccctgtcaca
acccctgcaaaggaggctaacgccagcagagggaggaagaaggaaaaacagaggaaacgt
cgcagtaacagctcatcgtcctcttcgtctggctcatcttcggggtcttcatctagcggt
agttcctcttcttcctctggatccagccactcgtcgtcgtcctcatcgtcctcttcgtca
aaaagcagcagccgaagccgcaaccgagacgccggcaagcgcaagaggagggcgtcggat
agaagcagggacaagaagaaagaagacaagagtcaccgcaagaggggaggaagtagcgga
ggagggagggactcgaagggctcaaggaagaggaggagcgaagaaggaaggggcaggtct
tcccggagtgatagggagcataaagatagagacaggaaggacaagaggcgctaa
DBGET
integrated database retrieval system
