Cololabis saira (Pacific saury): 133462336
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Entry
133462336 CDS
T09849
Symbol
rin3
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133462336 (rin3)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133462336 (rin3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
EcsC
RA
GPW_gp25
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
133462336
NCBI-ProteinID:
XP_061599527
LinkDB
All DBs
Position
16:complement(10408133..10453604)
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AA seq
1080 aa
AA seq
DB search
MMEASVVSQDTGHSSPLTGALASSSSSSSPSSPPSLVSLPPSRPSRPKPPPPMLKSSQLP
SRPPLPPSAPVPLPPPPAPPAATSPPSLPPPLSPTVVSPSPLQSTVSSDPEPVRSPPAPL
APPSSAAVSPPSSSPSLPASLPPSPAPPALSSIDQLLGSVSVWQLKGLSPDQTTDILEKE
TAGAFLVNCPEEKTTVISVRLPDHQGPRLVQNLLVKQHKSFVHLQGSSLVFDDIFKLISF
YCTSRDILTVPLKLPRAVTTTTQREGLEVISAMGADFWTSDLNQKTKNQDQTIQPSIYLY
VNPVAVEEPPSKDLNPSSTSRPEPVTKDTVASSLQNGEGSQSVRPQVKAPAKSNQEIKYK
RPPPRRPPSLGSGSGTGLLFSSTPSPPISTAVTPQAERKEEGKGGVGEGDDRKSVSTSPP
PPSRPPVPLQGRCAPPLPPAPLSRTSSRKSTDREAGRPKPAKKSERGMGGERGEEKTGTR
PGLLGEDAEQEASSQQEEEGGNKSEIDGQKEEKEVKMVKEDKQKSIPQCPPPAAKKPSRP
VPPPRTRPSITDSSVGSSNQSAGTRVPPPPSSARRPDVSLYSPQGGAALGPDPDSCSNSS
TEEEAEPNQEQEQNHKSVAESRSPKAAVRRTPTTVMLDRARLRLSTVLTGLISHDRRLTK
RIVELARDPQSYFGNLVKEHRAFTLETMSNHQTSTELLQEIRQMMTQLKSYFLQSSELQT
MLEPQHQYPQDKLENIVEAALCKSVLKPLREPIYQTLERLHNNGGDMKQLGQNQSAVLGS
TTTALGITTSVPETSAMEKISIKLNRLHQEYSPQKKIELLLKTCKIIYDTMSVSSPGRAH
GADDFLPVMMYVLARSNLSGLQLDVEYMMELMDPSLTLGEGSYYLTTTYGALEHIKTFDQ
QRAATRQLSREVQDSIHRWERRRTLNQERMSQGSVRDFLTVYCPDIGSEAKTLGVFPTTT
IEELTEQCAARFEEDSYVLSVFLDDVQQDVGPTDLALSVKNSCQPGAYCFIYHPVGQATH
PSGRTCPSDPPPAPPTPSLLAANVAANVAANVAANVAANVAAPVDAEPEPEVEEETLIHL
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggccagcgtcgtgtcccaggacaccggccatagcagccctctgacgggagcc
ctggcctcctcctccagctcctcgtctcccagctctccgccctcgctggtctccctccct
ccatcccggccaagtcgtcccaagcctccacctcccatgctgaaatcttcccagctcccc
tctcgacctcccctgcctccatctgcccctgtgcccctccctccccctcctgcccctcct
gctgccacatctcccccatctcttccccctcctctctcacccacggtggtctcgccgtct
cccctacaatcaactgtctcttctgatccggagccagttcgttctcctcctgctcctctg
gctcctccatcctccgctgcggtgtcacccccctccagctccccctctcttcctgcctcc
cttccaccctcaccagctcctccggcgctgagctccatcgatcagctgctcgggagcgtt
tctgtgtggcagctcaaaggactcagcccagaccaaaccactgatatccttgagaaagag
acagcaggggcatttctggttaactgtccagaagaaaagaccacagtgatttctgtccgt
ctgcctgaccatcaggggccgcggcttgtgcaaaatctgctcgtcaaacaacacaagtcg
tttgtccatttacagggttcctctttggtttttgatgatatcttcaaactcatctccttc
tactgtaccagcagggacatcctgaccgtcccgcttaagttaccccgagccgttaccacg
acaactcaaagagagggcctggaggtcatttcagcaatgggtgcagatttctggacatct
gacctaaaccagaagacgaagaaccaggaccagactatccaacccagcatatacctgtat
gtgaacccagtcgctgtagaggagccgcccagcaaagatctgaacccctcctccacctcc
agacccgagcccgtaaccaaagacactgtggcctcgtccctgcagaatggagaaggctcc
cagagcgtcaggccgcaggtcaaagctccagccaaaagcaaccaggagattaagtacaag
cgccccccgccgcggcgaccccccagcctgggctcaggctccggcacgggcctcctcttc
tcctctaccccatcacctccgatttcaaccgctgtaacacctcaagctgagagaaaagag
gaaggaaagggaggagtaggggagggagatgacaggaagtcggtgtcaacatcacctcct
cctccgtcgaggcctcccgtccccctgcagggtcgctgcgccccgcctctgccccccgcc
cctctcagtcgcacctcctccaggaaaagcacggaccgagaagcagggagacccaagcct
gccaagaaaagtgagagagggatgggaggagaaagaggagaagagaagacggggactagg
ccaggcctgctgggtgaggatgctgagcaggaggccagcagccagcaggaagaggagggg
ggaaacaagagcgagatagacggacagaaggaggagaaagaggtgaagatggtgaaagag
gacaaacagaaatccattccccagtgtccgccaccagcagcaaagaaacccagtcgtccc
gtccctccaccgaggacaagaccctccatcacagactcaagcgttggctccagcaatcag
agcgctgggacgagagtaccaccacccccgtcctcggcccggcgccccgatgtgtccctg
tactcgccacaggggggcgcggctctggggccggaccccgactcgtgttccaacagcagc
accgaggaagaggcagaaccgaaccaggagcaggagcagaaccacaagagcgttgcagag
agccgcagccccaaggcggccgtcaggagaacccccaccaccgtcatgctggaccgggct
cgcctccgcctgtccaccgtgctcaccggcctcatcagccatgaccgccgcctcaccaag
cgcatcgtggagctggccagagacccgcagagctacttcggtaaccttgtcaaagagcac
cgagctttcaccttggagacgatgtcgaaccaccagacttccacggagctgttacaggag
atcaggcagatgatgacccagctgaagagctacttcctgcagagctccgagctgcagacc
atgctggagcctcaacatcagtatccacaagacaagctcgagaacattgttgaggctgct
ctgtgtaagagcgtcctgaagccactgagggagccgatctaccagaccctggagaggctg
cacaacaacggcggcgacatgaaacagctgggacagaaccagtctgctgtcctgggcagc
accaccacagctctgggaataaccacctccgtccctgagacctctgctatggagaagatc
agcatcaaactgaacagacttcatcaggagtactccccgcagaagaagattgagctgctg
ctgaaaacctgcaagatcatctatgacaccatgtctgtcagctctccagggcgggcccac
ggcgctgatgacttcctgcctgtgatgatgtacgtcctggccagatccaatctgtccggc
ttgcagctggatgttgaatacatgatggagttgatggacccgtcgttgacgctgggagaa
ggttcctattacctgaccaccacgtacggggcgctggagcacattaaaaccttcgaccag
cagagggctgccacgcggcagctcagccgggaggtccaggactccatccaccgctgggag
aggagacgcacgctcaaccaggagcgcatgtcccagggatctgtccgggacttcctgacg
gtgtattgtcctgacattggaagcgaggccaaaactctgggtgtgttccccacaacgacc
atcgaggagctgactgagcagtgtgccgcacgatttgaagaagactcctacgttctcagt
gtgttcctggatgacgtgcagcaggacgtcggtcccacagacctggccctcagtgtgaag
aacagctgccagccgggagcgtactgcttcatctaccatcctgtaggtcaggccacccac
ccgtccggccgcacctgtccctccgacccgccgccggctccgcccacgccgagcctcctg
gcagctaacgtggcagctaacgtggcagctaacgtggcagctaacgtggcagctaacgtg
gcagctcccgtcgacgcagagccagagccagaggtggaggaagagactctgattcacctc
taa
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