Cololabis saira (Pacific saury): 133462469
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Entry
133462469 CDS
T09849
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133462469 (srrm1)
03015 mRNA surveillance pathway
133462469 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133462469 (srrm1)
03041 Spliceosome [BR:
csai03041
]
133462469 (srrm1)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133462469 (srrm1)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
133462469 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
133462469
NCBI-ProteinID:
XP_061599713
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All DBs
Position
16:28815446..28829450
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AA seq
864 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITRRVTEIL
GFEDDVVIEFIFNQLDEKNPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQMEQEKLASLRKVDEDKKEKDIRERAQSKSPRRRKTRSPSPRRRSP
VKRERKRSPSRSPRRKPSPPPSSSPPPPLMQLPTKPTEQQVEPDTSARAIPGPVVQEAPS
AGDAVAEVVKADSVTEVKEPSPEKTHKKEERPRSRERERDVRRERPHHRSRSHSRSRRRR
SRSRSYSPRRRQSPRRRMSPRRRSPPRRGPAPPRHRHRRSPVRRRRSRSASSSGSSSSSS
RSPKKAVKRISTSPPRKPPHRPRISMSPPVKVKRSPSPRARRGRGSVSPPRSSGIKRNQG
GRGESPSNNAKTRPSEGSESDEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEG
PKRPAPGPGARNGEVRKKRSRTPSPRRRHRDPSPRRRRSPSPPRRRRTPSPPRRRRSPSP
PRRRSPSPPPRRRSLSSRRYSPPIQRRYSPSPLPPQKRKMSNSPMKRSPPLAKRRPSRSP
KRRSPPVPRRRSPPSSMSPPRHRRSPMSSNRPSRDTRSPVVSARRFSPSPMNRSHTVRGS
TSPQRRFDISSTSPTNQRRQKSPSHNSKLIRRVSRTPEPRNNQRASPSPKPLRRASRSRS
VSPEPPVQKRPVPASASPSPSRSASRSPPPPPPPPAKKASSASGSQSPSKNSDVDGGGKK
KKKKKEKKHKKDKKHKKHKKHKKEKSSATVMEDPQGNQAAEEDVDSRKESDSEVDDGLDD
LEKHLREKALRSMRKAQVSPSQMS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacgagtgcggagcaagacaaccgtttcagcaacaag
cagaaaaaactgcttaagcagctgaaatttgcagaatgcctggacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccttggattactaggcgtgtgactgagatcctg
ggttttgaggatgacgtggtcatagagttcatattcaaccagcttgatgaaaagaaccct
gatagcaagatgatgcagatcaacctgacaggcttcctcaatgggaagaatgcccgtgaa
ttcatgaaagacttgtggcccctgcttttgagtgcacaggagaatattgctggcatccca
tctgcttttctggaacaaaagaaggaggaaatccgacagagacagatggaacaggaaaag
cttgcctccctgaggaaggtggatgaagacaagaaggagaaggacatccgagagagggct
cagtcaaaaagcccaagaaggcggaaaacacggtcaccatcaccgcggcgaaggtctcca
gtgaagagggaacgaaaacgaagcccatcacgatccccgaggcgcaaaccaagtccacct
cccagcagctcgccccctccacctctcatgcagctgccaacaaaacctacagagcaacaa
gtggagccagatacatcagcgagagccataccaggaccagtcgtgcaagaagctccttca
gccggtgatgcggttgcagaagtcgtaaaagctgattcagtgactgaagttaaagagccg
tcgccagagaagactcataagaaagaggaaagaccacggtctcgtgaaagggagagggat
gtgagaagagagagacctcatcaccgctcccgctctcattctcgatctcgcagacggcgc
tcccgctctagatcttactcccctcgtagaagacagagtcctagaagacggatgtccccc
cgtcggaggagcccccccagacgtggccccgcccctcccagacacagacacaggcgctcc
cctgtccgcaggaggcgctctcgttctgcgtcatcttctggcagcagttcttcaagttca
cgctcaccaaaaaaagctgtgaaaagaatatctacttcaccaccccgaaaaccgccacat
cgtcctcgcatttctatgtctcctccagtaaaagtcaaacgatcaccgtctccacgagca
agaaggggccgaggctctgtttcaccacccagatcatcgggtataaagcggaaccaagga
ggaaggggtgaatctccatctaacaatgccaagacccggccgtcggagggatcagagtcc
gacgaggataaaaatgagaaaggtgcaacagcagattcggtgcagcagcgacgtcagtat
cggaggcagaatcaacaatcatcttcagattctggatcctcatcctcagaagatgagggg
cctaagcgtccagcaccaggaccaggtgccagaaatggagaagtcaggaaaaagcgtagc
cgtacaccctcgccccgcaggcgacacagggatccttcaccgaggagaagacggtctcca
tctcctccacgcagacgtcgcaccccatctcctccccggcgtcgcagatctccctctcct
cctagacggaggtctccttccccaccaccccgtcgtagatccttgtcctccagacgatat
tctccacccatccagcgtcgctacagtccttcacctttgcctccacagaagaggaagatg
tcgaattcgcccatgaaacgctctccgcctcttgcgaagcgacgcccctctaggtctcct
aagcgtagaagccctcctgttccaaggagacgctcacctccttcctctatgtctccgcct
agacacaggaggagccctatgtcttctaataggccaagtagggacacacggtctccagtt
gtgtcggccagacgcttctccccatcacctatgaaccgcagtcacactgttaggggttcc
actagtcctcagagacgttttgatatctccagtacatctccaactaaccagcggagacag
aagtccccgtcacacaacagcaaactcatccgcagagtgtctcgcaccccggagccccgt
aacaatcagagagcctctccgagccctaaacctctgaggagagcttcaagatccagatca
gtttccccggaaccacctgttcaaaaacgtccagttcctgcatctgcttctccatcacca
tctcgctctgccagtcggtctcctccaccgccaccaccaccaccagccaaaaaggccagt
agtgcttctggtagccagtctccaagcaagaattcagatgttgatggtggcggaaagaaa
aagaagaagaagaaggaaaagaaacacaagaaagataagaaacacaagaagcacaagaaa
cacaagaaagagaaaagcagtgcaactgtgatggaagatcctcaagggaaccaggccgct
gaggaagatgttgactcacgaaaggaatcagacagtgaagtggatgacggtttggatgat
ctggaaaagcaccttcgggagaaggcactacgctccatgaggaaggcccaggtctcccca
tcacaaatgtcctaa
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