Cololabis saira (Pacific saury): 133462524
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Entry
133462524 CDS
T09849
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133462524 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133462524 (lrfn5a)
BRITE hierarchy
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_5
LRR_1
ig
Ig_2
LRR_9
fn3
C2-set_2
Rop
Sp38
Motif
Other DBs
NCBI-GeneID:
133462524
NCBI-ProteinID:
XP_061599789
LinkDB
All DBs
Position
16:complement(31445491..31639466)
Genome browser
AA seq
850 aa
AA seq
DB search
MERLLLCVMLAIAMAVRAQVCPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFTDLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDSIPWEAIQKMISLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTATSFALSFGG
NPLHCNCELLWLRRLNREDDLETCATPQHLSGRYFWSVPEEEFLCEPPLITRYSHEMRVL
EGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYNNGTLDILITTVKDTGSFTCIS
SNPAGEAHQTVDLVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKSGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDVMTSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSMSMTDVHSQTNGQGGCSVTPSSSKHGSLALDDL
SGPTKKRSGGRGGKDTLTQSSECSLPDCSTATSVLSQSWGARSPTAVDEDREKAGEQRPK
SNVVPAATATGSLHKPSRKPAPRETGLVFSNPSAVPEILPSASSPRPPATPNPQENPNTN
RNNSTSLKQTPPPPFAPSPFSSAFPTPSPVPSTRFRETPILRRAPRTASSSAKYQTLPVE
EGGRSRARRRYSLSEGASKSHSSHHGAGKPKLGRKMRDKRSQSMSGMLLPKDEDKHKGRC
DSKWILESTV
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctgttgctctgtgtgatgctggcaattgccatggcagtacgggctcaggtc
tgcccgaaacgctgtgtctgtcagatcctgtcacccaacttggcaaccctctgtgctaag
aaaggactactgtttgtaccgccaaatattgacagacatactgtggagctacggctggct
gacaactttgtcacaagtgtgaaaaggaaagactttgcaaacatgacacggctggtggac
ctaacattatcccgaaacaccatctcctacatcacacctcatgcctttactgatctagaa
aatctccgagcgcttcatctcaacagtaaccgtctgacgaggataggcaatgatacgttc
agcgggatgtccaaacttcaccacttgattttgaacaacaaccagctggttctgatccac
cagggagcattcaatgacctactagcactggaagagttggaccttagctacaataatttg
gactctattccatgggaagcgatccagaaaatgataagcctccacacgttgagtttggac
cacaacatgctggatttcattccagagggaaccttctccctccttcagaaactcaaccgg
ctggatgtcacttctaataagcttcaaaagttaccgccagaccccctttttcaacgagca
caggtcctagctacatcaggaatcatgaccgctacgtcttttgcgctgtcgttcggtggg
aatccgctccactgtaactgtgagttactgtggctgaggagattgaaccgagaggacgat
ctggagacatgcgccacgcctcagcacctctctggtcgatacttctggtccgtccctgaa
gaggagtttctctgtgagcctcctctcatcaccagatactcccatgagatgagggtcctc
gaaggtcaaagagttgcactcaggtgtaaggcgaggggcgacccagaaccagccattcac
tggatctctcctgagggcaagctggtgtctaactcctccagaacactggtctacaacaac
gggaccctggacatcctcatcactactgtgaaagacaccggctccttcacctgcatctcc
tccaaccctgccggcgaagcccaccagaccgtggacctggttatcataaaactccctcac
atctccaacaacaccaacaacatccaagagcccgacccgggatcatctgacatctccacg
tcgacccggggtggtgctaacggcagcaacgtgacaggagatgtcaagagtggggtggat
aagagggtggtgacggcagaggccacgtcatcaactgccctgatcaagttcaacttccag
aggaatatacccggcatcaggatgttccagatacagtacaatggaagtcaggacgactcg
ctggtgtacagaatgatacctccatcaagcaagaacttcctggtaaataatctggcagca
gggactcagtacgacctctgcgtcctggccatctacgatgatgtcatgacctctctgacg
gcgacgcgagtggtcggctgcgtgcagttcaccaccgagtcggagtacatgaggtgtcat
ttcatgcagtctcagttcctcggcgggactatgatcatcatcatcggagggataatagtg
gcctcggtgctcgtgttcatcatcatcctgatgatacgctacaaggtgtgtaatcctggt
gaaggtggcaaaggcgtttcaatgtcaatgaccgatgttcactcacagaccaacgggcag
gggggatgcagcgtgactcccagcagctctaaacacggatcactcgcattggacgacctg
tcagggcccacgaagaaaaggagcggaggacgtggggggaaggatacgttaactcagtcg
tccgagtgctccctgcccgactgctccacagcaacatctgtcctcagccagagttgggga
gccagaagcccaacagctgtagatgaggatcgggagaaagcgggagaacagagacctaaa
agcaacgtcgtacccgccgccactgccaccggttccctgcacaagccgagccggaagccg
gctccccgagagaccggcctggtcttctctaacccttcagcagtgcctgagatactgccc
tctgcgtcctccccgcgccctcccgctactcccaaccctcaagagaacccaaacaccaat
cgcaacaactccacctctctcaaacaaaccccgcctcctccttttgccccttcccctttt
tccagtgctttccccactccgagcccggttccctccacacgattcagagagacgcctatc
ctccgccgggctcctcgcaccgcttcctcctcggctaagtaccagactcttcccgtggag
gagggaggacggagccgggcgaggaggaggtactcgctcagcgaaggagcctcaaagagt
cactcgtcccatcacggagcaggaaaacccaaattagggcgtaaaatgcgggacaaaagg
agccaatcaatgagcgggatgctgctccctaaagacgaggacaaacacaaggggaggtgc
gattccaaatggatcttggaaagcacagtttga
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