Cololabis saira (Pacific saury): 133462544
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Entry
133462544 CDS
T09849
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133462544 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133462544 (mlh3)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
133462544 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
KxYKxGKxW_sig
Motif
Other DBs
NCBI-GeneID:
133462544
NCBI-ProteinID:
XP_061599823
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Position
16:24054567..24062391
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AA seq
1147 aa
AA seq
DB search
MIKCLPTAVQGRLRSGVSLPSVQQCVEELVLNSCDAGATCIGVRMDLQAFTVHVVDNGAG
MALDDMEQVGNRYHTSKCSSVADLDNLSWYGFRGEALASIISLSTLVEISSRTRLSVKTH
VKLFKDGKGLPVFEAETSRPSAGTTVIICNFFHNMPVRRKRVDAVLEGERIRHRVEAVSL
MHPSVSFTLRNDCTGAMMVQLSKARDTYHRFVQIHGLARAEKLGEISYTHKQFEVAGHLG
KEGHYNNSLQFLYVNDRLLLKTRIHKLLNLLLRRLSCSNLKSDSPDGQSVIRSPKHKRNN
ELFGVYVINIKCSYSEYDICLEPAKTLIEFKDWDGVLLCVEEAVKAFLRRENLMTGFSQD
DLDSVSPKLFGACIPDQEEAVDKADQATVGASTLDASVGMKLASEFVHRKNTNERVCLES
DLIESKVEAGNVLEQMLHSDSEPETVTINDKEEATFREPVDGMKVSHITDEQDAELTSDM
SNSNVKSFHNLVQPVQADAGYNEQPASHRKIRLSDPFIHTSLQIPNVTQTSCPVFQDPAA
KCEKNSFASKRKISLEAVQERSSQKACRDFDPGVPSKISRAVPCQKLSTFRESGSLDKFR
RIYVKSDEKKITLPHFENENILPLADGFVLNPSSLAVRQDDSQVGELTGTQEEEVKKSLL
QNPPSLSTIKAQKRSKISLAAKLFHLKQHRSEYSEASLSAPKKTSEEEICDAAQDENKNL
NLVDSEDVGPNLGCSTDPQPTVNDEATMSSDWLHHYDMSVGKTVYVNRMTGLSRYEEPAT
EETQVHCTSDVTNMAVSVISEMGMEYTCYPFQMDLVLPFLPKSKTDRVISSGIDFRDSAG
ESSNSLSLLYSKWNNPVFVRPPVVGLDISSGQANGLAVKIHNILFPYRFSKAMFHTLKVI
HQVDKKFLACLINTSEDDSAEDKETEGNLLVLVDQHAAHERVRLENLVADSYEDDPDVLG
EKRLCSSTIVPPLEISVTEEELRLLRSCQPHLRSLGLEVTFSQAATQQVFVGKVPLCFME
KESNELRRGRPSVIKSVVEEYLREQIELLRSAGRVRGTLPLTVLKVLASLACHGAIKFND
TLSRDECSSLVASLSSCQLPFQCAHGRPSIVPLVDILHLDKDQREVQKPNLQKLRRMYKA
WELYGDK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttgcccacagcagtgcagggccggctccgctccggcgtgtccctcccg
tcggtgcagcagtgcgtggaggagctggtcctgaacagctgcgatgccggggccacgtgt
atcggggtgcgcatggacctgcaggcttttacagtccacgtggtcgataacggcgctggc
atggccctggatgacatggagcaagtgggaaacagataccacaccagcaaatgcagctct
gttgcagacctggacaacctgagctggtatggcttcagaggagaagctctggccagcatc
atctctttatccacactggttgaaatctcatcccgaaccagattgtcagtgaaaacacac
gtcaaactgttcaaagatggaaaggggttgcctgtgtttgaggctgagacttctcgaccc
tctgcaggaaccactgttattatctgtaacttcttccacaacatgccagtgcggaggaag
agggtggatgctgtgctggagggggagaggatcagacatagggtggaggccgtgtccctc
atgcacccctctgtgtccttcaccctgaggaacgactgcaccggggccatgatggtgcag
ctctccaaagccagggacacgtatcacaggtttgtccagattcacggccttgcacgggca
gagaaactgggagaaatcagctacacgcacaagcaatttgaagtggccggtcacctgggc
aaagagggacactacaacaacagtttacagttcctgtatgtgaatgacagactgctgctg
aaaacacgtatacacaagctgttgaaccttctcctgcgcagactgagctgttcaaacttg
aaaagtgacagtccggacgggcagtccgtcatcaggagtccaaagcacaaacgaaacaat
gagctctttggggtttatgtcatcaacattaaatgctcctactcggagtatgacatttgt
cttgagcctgccaaaactctaatagagttcaaagattgggatggtgttttgctatgtgtt
gaagaagcagtcaaagctttcctgaggagggagaatttgatgactgggttttctcaggat
gatttagactctgtttctccaaaactgtttggcgcttgcataccagatcaagaagaggct
gtggacaaagccgatcaagcaactgtcggtgcttctacactggacgccagcgttggaatg
aaactggcatctgaatttgttcatcgtaaaaacacaaatgaaagggtttgtctggagtct
gatctgatagagagcaaagttgaagctggaaatgtgttggaacagatgctgcacagtgat
tcagagcctgaaactgttactataaatgataaagaggaggcaacattcagagaacctgtt
gatggtatgaaagtatcacacataacagatgaacaagatgcagaattaaccagcgatatg
tccaacagtaatgtaaaatccttccacaaccttgttcaaccagttcaagctgatgcaggt
tataatgaacaaccggcaagccacaggaagatcagattgtctgatcctttcattcacacg
agtctgcagattccaaacgtcacccaaaccagctgccctgtgtttcaagatccagctgca
aagtgtgagaaaaactcctttgcatccaaacgtaaaatctcgctggaagcagtccaagag
agatcctcacagaaggcctgcagagactttgatcctggtgtcccctcgaagatttccaga
gctgttccctgtcagaaattgtcaacattcagggagtctggatctctggacaagttccga
cgaatatatgtcaaatcagatgaaaaaaaaataacacttcctcattttgagaacgagaat
atacttcctcttgcagacggttttgttttaaatccttcaagtttggctgttcgacaagat
gattctcaagtgggtgagttgacaggaacacaagaagaagaggtgaaaaaaagcctcctc
caaaacccaccatccctttcaactattaaagctcagaagagaagtaagatatcgttagct
gctaaacttttccatttaaaacaacataggtcagaatattcagaagcctcactgtctgca
cccaagaaaacctcggaggaggaaatctgtgatgctgcccaagatgagaacaaaaatctg
aatcttgtggattctgaggatgttgggccgaacttggggtgcagcaccgatccacagccc
actgtgaatgatgaagcaaccatgtcaagtgactggcttcatcactatgacatgtctgtt
ggaaagactgtttatgtgaacagaatgaccgggctcagcagatacgaggagccggccaca
gaagaaacccaagtgcactgcacgtctgatgtcaccaatatggcagtcagtgtcatctct
gagatggggatggaatacacgtgttacccatttcagatggacctagtcttgcctttcctg
cctaaatccaagacagacagagtaattagctcaggaattgatttcagagatagtgctggt
gaaagctccaactcattgtctttattatactctaaatggaataatcctgtatttgttcgc
cctcctgtggttggactggatatttccagtggacaagctaatggattggccgtaaagatc
cacaacatcctgtttccataccgcttttctaaggccatgtttcacacgttgaaggttatt
catcaagtggataaaaagtttcttgcctgtcttatcaacacgagtgaagacgattctgca
gaagacaaagaaactgaaggaaacctgcttgtgctagtggaccagcacgctgcacatgag
agagttcgacttgaaaacttagttgcagattcatatgaggatgacccagatgtcctcgga
gagaaacgtctgtgttcatcaaccatcgtgccacctctggagatcagtgtaacggaggag
gagctaaggctgctcaggtcttgtcagccacatttaaggagtttaggcctggaagttact
ttctcacaagcagcaactcagcaggtgtttgttggaaaggtaccgttgtgctttatggaa
aaggaaagtaatgagctaaggcgaggtagaccatctgttatcaagtctgtcgttgaggag
tatcttcgagagcagattgagttactccgctcagcaggcagggtgagaggaactttacct
ctcaccgttttgaaagtgcttgcctccctcgcatgtcacggtgcaattaaattcaacgac
accctgagcagagatgaatgctcaagcctggtagcttccttgtcctcttgccagctgcct
ttccagtgcgcccacggccgtccttccatcgttccgctggtagacatccttcatttggac
aaagaccagagggaggtccagaaacccaacctgcaaaagctgagaagaatgtataaggct
tgggagctgtatggagataaataa
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