Cololabis saira (Pacific saury): 133462604
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Entry
133462604 CDS
T09849
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133462604
03036 Chromosome and associated proteins [BR:
csai03036
]
133462604
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133462604
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133462604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
Roughex
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
Zf-C2H2_ZNF451_C
zf-met
LIM
zf-C2HE
RXT2_N
zf-C2H2_6
zf-C2H2_15
zf-WIZ
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
133462604
NCBI-ProteinID:
XP_061599915
LinkDB
All DBs
Position
2:complement(32711195..32721153)
Genome browser
AA seq
764 aa
AA seq
DB search
MEGEVISMESAQAAALASEGKVLPEGGEALIQATQGEVTGNMEMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQAGAALGLGQLQLVQVPVTTATVEGLQATFVE
ASGNKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELHGAREEGADEEAG
EVESSMPQQEDPEWTKDPDYQPITGIRKGKKGKKSRLRYGDGDRDMDVSVYDFEEEQQEG
LLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHK
CHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSM
CDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHAR
FTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAV
FHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTFRQK
QLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHTENCNGEIIGEENGTPSPAKKS
RRGRKRKMQAKREDDDDDDDDDEEDDDDDNTEGELDDIEEEEELLHQIEMEQAASVVPIP
APVEPPVKRKRGRPPKNKPDAAAIIRVEDEATGEVDDIIVKKEVGADQDDGAAEEVVVGG
VKSTIQMEELSQEEETTPGVQGAMSEAPPNGDLTPEMILSMMDR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttatttccatggagtctgctcaagcggctgctttggcctctgaagga
aaggtcctgccagagggcggagaggccctaatacaagcgacgcagggtgaagtaactggc
aacatggagatgatggtgatggatgctctggatccaactctgttgcaaatgaagacagaa
gttttggaaggaggtggcacagtaactgttactggaggcgatgaaggccagattatcaca
cttcaggtggtgaacatggaggagcaggcaggcgctgcgctaggtcttggccaattgcag
ctggtgcaagtaccagtcaccacagcaacggtggagggactccaggccacttttgttgag
gcatcgggtaacaaggatgcagagccagttatctgtcacacccttcccttgccagaaggc
ttccaggttgtaaaagttggtgcaaatggtgaggtggaaaccgtggagcaggaggagctc
caggctgcccatgatgagttacacggggcaagggaggagggggcagatgaagaggcagga
gaagtagaatcctctatgcctcagcaagaagacccagaatggaccaaggacccagactat
cagccaataaccggtatccgtaaagggaagaaaggaaagaagagccgcctgcgttatgga
gacggcgaccgtgacatggatgtttctgtgtatgatttcgaggaggagcagcaagaaggg
ctgctgtcagaagtgaatgcagagaaggttgtgggcaatatgaagcctccaaagcctaca
aagatcaagaaaaaaggtgtcaagaagactttccagtgtgaactctgtagctacacctgt
ccgaggcgctctaacctggacagacacatgaagagtcacacagatgagaggccacacaaa
tgccacttgtgtggaagagccttcagaacagtcactctcttgaggaaccacctcaacaca
cacacaggcactcggccgcataaatgcacagattgtgacatggcatttgtgaccagtggc
gagttggtgcgtcatcgtcgttacaaacacacacatgagaagcctttcaagtgctctatg
tgcgactattcgagtgtggaggtgagcaagttgaaaaggcacatccgttctcatacaggg
gagcggcccttccagtgcagtctgtgcagctacgccagcagagacacatacaaactgaag
agacacatgaggacacattcaggtgagaagccgtatgagtgctacatatgccatgctcgg
ttcactcagagtggtaccatgaagatgcacatcctgcaaaaacacacagagaatgtggcc
aagttccactgcccacactgtgatactgtcattgcgcggaagagtgaccttggtgttcac
ttgcggaaacagcactcatttattgagacggggaagaaatgtcgttactgtgacgctgtc
tttcatgagcgttatgctctcatccaacatcagaagactcacaaaaatgagaagcgtttc
aagtgtgaccagtgtgactattgctgcagacaggaacgccacatgataatgcacaaacgc
acgcacactggggagaagccctttgcctgcagccagtgtgagaaaacctttcgccaaaag
cagcttctggacatgcatttcaagcgttatcacgatcccaacttcgtacccactgccttt
gtctgcagcaagtgtagcaagacattcacacgcaggaacaccatgctgcgtcatactgag
aactgcaatggggaaattattggagaggaaaatggaactcccagtcccgcaaagaaaagc
cgccgtggcaggaagaggaagatgcaggccaagagggaagatgatgatgacgacgacgat
gatgatgaagaggatgatgacgacgataacacagagggtgaattggatgacatagaggag
gaagaggaactcctccatcaaattgagatggaacaggccgcgtctgttgtccccatccca
gccccggtggagcccccagttaagaggaaacgtggccggcctccaaagaataagcctgat
gcggccgccatcatccgtgtggaggacgaggccactggagaagtagatgacatcattgtg
aagaaagaggtcggcgcagaccaggacgacggcgctgcagaggaggtcgtggttggcggc
gtgaaatcaaccattcagatggaggagttgtcccaggaagaggagacgacaccgggagtt
cagggggcgatgtccgaggctcctcctaacggagacctgacccctgagatgatcctcagc
atgatggaccgatga
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integrated database retrieval system
