Cololabis saira (Pacific saury): 133462638
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Entry
133462638 CDS
T09849
Name
(RefSeq) tubby-related protein 4-like isoform X1
KO
K24720
tubby-related protein 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133462638
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Other domain-containing proteins
Tubby family proteins
133462638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
SGL
Motif
Other DBs
NCBI-GeneID:
133462638
NCBI-ProteinID:
XP_061599957
LinkDB
All DBs
Position
16:38902631..38938978
Genome browser
AA seq
1854 aa
AA seq
DB search
MSRNYEQPGQSVGMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLA
TGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIF
VWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLE
SQISCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDS
TESDTDSDDSILPLARRVKPLLTVTFLSGDISLMNNYDDLSPGVIRSGLKDVEAQWCSQG
DLLAVAGMERHGVTSDSVCTSVIRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSR
LFMACGPALYVVRVEHRVASLQLLCQQGIASALREEKDIGKLNMPSLLCSYVTTAFIPTI
KPPIPDPNNIRDFVSYPTAGNERLHCTMKRAEDSPEAGGPCYTLYLEYLGGLVPILKGRR
ISKLRPEFVIMDPKTDGKAEEVCVNPMISYADSCNCSDSSDIDLSDEWVGKKSPKLSRGN
RLNMDSRKSPKLSRANQEGQRSPRLPTKKPPVRSPSLTRREFTMDGITEHNYLAQVTSNI
WGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISHDFMSLPVFNPNVF
SEDEDDLPVMGPSGVSGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNIQLDV
LTNPTATAAVAAAAAAASAPATDHSQDAVATPYPVPSRYSNPGQGIFSGMEMGPLLPGTL
PPPPPPHHLPPQPHSQRSHSQTLRQPPPKQSQLQQQQKTHHHQQQQQQHHHQSQSQQQLQ
LQQQQLQQQQHQQLQQQVHHQQQLQQQHQQLQQQHQQLQQQHQQQLQQHQHQQLHLQQQQ
HQQDQVQQQHQQQMQQGQQQVSSGHQLQHQHQHQIQQQQQQMQMQHEQMQQQQQQMQQQQ
QQIRQQIQEMRQQQQQLQQQHQQIQQQHQQMQRQHQQMQQQLKMQMSLPPPPSGYPTISL
QQVHILPQMPPPSTDPRLDRLEHAHTLKPSLPRTLPPSFADADGSLEIQMRKVNPPPPYP
GTVVSAAAATAAATPQTLVTNCDSPSVLAPDPCLKKDEFLLHPITLQYPTPLGYERITTF
DSSGNVEEVCRPRRRLIRNQNTYTVHSIGGSATLKVTSSDSKKIQLPYSSATLSRLSVPR
YSIPSGDPPPYPDPANQVTATLPAPQRINSNLIHATLRRDRRDTGLKVPQMMESSRTLPT
KAKMNSALSLSYQQRAPTALYTCTQCSSNSSSTSVSVSGGGPTSSGIAGGTVVRQDFPPG
KGAHHSTIIVHSKSASPLASQSSYSLLGTMDNSRDRTVYVNSAFTEDETLNQQCHLEKSV
RQLTLADVSLTVKRPPPYQWDASAADDFWLSADQTMLAAPPGPHKPPPLIIGQGQHLDMS
RLPFVLTTKPPASPGTGTLAFPSGYQIALSPFPPSVGHGGPPLQTLQNPPPQCPPNEVVT
PVSFAQQDPGLVLPPGYPPNLANLACCPLPPLYPGASSCAGLQLHPVSLHPWNPYPCPPP
LQDPPAPPLPTKNHQVLEKPILSPPPPTAPPPPPPLPPPPPPTELLPSKSAAEDLAESSN
GFPEPSSLNESPVPQESERFNKKSRKRLDSRPDEANVPTVSEGRSRKDGRGGLPDFNSLI
SSPRLGSREKKKPKGQREQPNKTKKMSRTANEFQDSSESEPELFISGDELMNQNQSSKKS
WKNKRSLRMASELEEIKCRKANEREDRSLGSQGFVYVMANKQPLWNEATQVYQLDFGGRV
TQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactatgagcagcctggccagtcagtagggatgttggccgccgtggaacat
ggtcccatcctgtgcagcgactccaacatcctctgcctctcgtggaaaggccgggtgccg
aagagcgagaaggacaagccggtgtgccggcggcggtactacgaggagggctggctcgcc
acggggaacgggcggggagtcgtcggggtgacgttcacgtccagccactgcaggagggac
cggagcacgccgcagagaatcaactttaacttacggggacacaacagtgaggttgtcctg
gtgcgctggaatgagccatttcagaaactggcaacctgcgatatggagggaggtattttc
gtgtggatccagtacgaagggaggtggtccgtggagctggtgaacgacaggggagcccag
gtgagcgacttcacctggtcccatgacggcactcaggccctgatcgcgtacagagacggc
ttcgtgctggtgggctcggtcagcggacagagacactggtcctccgagatcaacctggag
agtcagatcagctgcggcatctggacccccgacgaccagcaggtcttgttcggcacggcg
gacggccaggtgatcgtgatggactgccacgggcggatgctcgctcacgtcctgctgcac
gagtccgacgggatcgtgagcatgtcgtggaactgccccgacttcctggtggaggacagc
acggagagcgacaccgactccgacgacagcatcctgcctctagcgcggcgagtcaagcct
ttgttgacagtcaccttcttatcaggagatatcagtctgatgaacaactatgatgacctc
tctcctggtgtgattcgctcagggcttaaagatgtggaggcccagtggtgctcacaggga
gacctgctggcggtggccggcatggagcgacacggagtcacttctgactctgtgtgcaca
tccgtcatcaggaatgctctggttaagttctacaacgtccaaggcgaacacatctacacc
ctggaaacacctgcacagagacccatcaccaccatctgctggggtcacagagactcccgc
ctcttcatggcctgtgggccggctctctacgtggtgcgggtggagcaccgcgtggccagc
ctgcagctcctgtgccagcagggcatcgccagcgccctgcgcgaggagaaggacatcggg
aagctgaacatgccctcgctgctgtgctcttacgtcaccaccgctttcatacccaccatc
aagcctccgattcccgaccccaacaacatacgggacttcgtcagctaccccacggccggg
aacgagcggctccactgcaccatgaagcgagccgaggacagtcccgaggcgggcgggccc
tgctacaccctgtacctggagtatctggggggcctggtgcccattctcaaaggacggcgc
atcagcaaactcaggccggagttcgtcatcatggatcctaaaactgatggcaaggcagag
gaggtgtgcgtgaatcccatgatctcgtacgccgacagctgtaactgctccgactccagc
gacattgacttgagcgatgaatgggtcgggaagaagtcgcccaagttatcccggggaaac
aggttgaacatggactcaagaaaatctcccaaactgtcacgtgccaaccaggaaggccag
cggtcgccacggctaccgacgaagaagcccccggtccggtcccccagtctgacgcggcga
gagttcaccatggacgggatcacagagcacaattacctggcacaagtcacgtctaacatc
tggggaacaaagttcaaaatagtcggacttgcctcgttcttaccagccaacctcggtgca
gtcatctacaagaccagcttgctacatttgcagccgagacagatgacgatctaccttcca
gaagtgaggaagatctctcatgacttcatgagcctgccggtgttcaaccccaatgtcttc
agtgaggacgaggacgacttaccagtgatggggccgtccggggtgtctggagataaccct
ccctgcaccgtcaacattcccatcgctcccatccacagcccggctcaagccatgtctcca
actcagagtatcggcctggttcagtctcttcttgctaatcagaacatccaactcgatgtc
ttgaccaatccgacggccacagctgcagtagcagctgcggcggcggcagcctccgcccct
gccaccgatcacagccaggatgccgtcgccacaccttaccccgtgccgagtagatactca
aaccctggccagggcatcttcagtgggatggagatgggtccccttctccctggtactcta
cctcctccaccgcctcctcaccacctgccgccgcagccgcactcgcagcgctctcattcg
cagacgcttcgccagccgccgcctaaacagtcgcagctgcagcagcagcagaaaactcat
caccatcaacagcagcagcaacagcaccaccatcagtcccagtcgcagcaacagctgcag
ctgcagcagcaacagctgcagcagcagcagcaccaacagctgcagcagcaggtgcaccac
caacaacagctgcagcagcagcaccaacagttgcagcagcagcaccaacagctgcagcag
cagcaccaacaacagctgcagcagcaccagcatcaacagctgcacctccagcagcaacag
caccaacaagaccaggtgcagcagcagcaccaacagcagatgcaacagggccaacagcag
gtgagcagcggccaccagctgcagcatcagcatcagcatcagatccagcagcagcagcag
cagatgcagatgcagcacgagcagatgcagcagcagcagcagcagatgcagcagcagcag
cagcagatcaggcagcagatccaggagatgaggcagcagcagcagcagctgcagcagcag
catcagcagatccagcagcagcatcagcagatgcagaggcagcaccaacaaatgcagcag
cagctgaagatgcagatgtcgctgcctcctcctccatccggctatccgaccatttccctg
caacaggtccatatccttcctcagatgccgcccccttcgaccgacccgagactcgacaga
ttggagcatgcgcacacgctgaagcccagcctcccgcggactctacctccctccttcgcc
gacgcagacgggtctttggagatccagatgaggaaggtaaaccctcccccaccctacccg
ggaactgtagtgtctgctgctgcagctacagcagctgctacccctcaaacgctcgtcacc
aactgtgacagcccgagtgtcctggcgcctgatccctgcctgaagaaggacgagtttttg
cttcaccccatcactctgcaatacccaacacctctggggtacgagaggatcacaaccttc
gacagcagcggcaacgtggaggaggtctgtcggccgcgcaggcgcctcattcgcaaccag
aacacgtacaccgtccacagcatcggggggtcggccacactcaaagtcacttcctcagac
agcaaaaaaattcagctcccgtacagctcggcaactcttagtcgtctgtccgtccctcga
tactccatacccagtggagacccccctccttatcccgatcctgccaatcaagtgaccgcc
acgctccctgcgcctcagaggatcaacagcaacctgattcacgccaccctacgtcgtgac
cgcagagacacggggctcaaagtgccccagatgatggagagctcccggacactccccacc
aaggccaaaatgaacagtgcattatcgctctcctaccagcagagggcgcccaccgcattg
tacacgtgcacgcagtgcagcagcaacagcagcagcaccagcgtgagcgtgagcggcggt
ggacccaccagcagcgggatcgccggtggcacggtggtgaggcaggacttcccgccgggg
aaaggagcccaccacagcaccatcatcgtgcactccaaaagtgcctcgccgctggcgtcc
cagtcgtcctacagcctgcttggcaccatggacaacagccgggacagaaccgtgtacgtc
aactctgccttcacggaagacgagactctgaatcagcagtgtcacctggagaaatcggtg
cgtcagctgactctggccgacgtcagcttgacagtcaaacgccctccgccttaccagtgg
gacgcctccgccgcggacgacttctggctgagtgcggaccagaccatgctagccgcgccg
ccggggccccataaaccgcctccgctcatcatcggccagggtcagcacctggacatgtct
cgccttcccttcgtcctcacgaccaaacctcccgccagtcctggcaccggcactctggcc
ttcccgtcggggtaccagatcgccctctcgccgttccccccgagcgtgggccacggcggc
cccccgctgcagaccttacagaatcccccgcctcagtgtcctcccaacgaagtggtcacc
ccggtctcttttgctcagcaggaccccggtttagttttgccgccaggctacccccctaac
ctggccaacctggcctgctgccccctgccgcccctgtaccccggagccagctcatgcgcc
ggcctccagctgcaccccgtcagcctccacccctggaacccttatccctgcccgccgccc
ctgcaggaccccccggcgccccccctgccgaccaaaaaccatcaggttttagagaagccg
atcctgtccccacctccgcccaccgctccgccgccaccgcctcccttgccgccgcctcct
ccgcccaccgagttgctgccgtccaaaagtgccgcggaagatctagcagagtcttccaac
ggcttcccggagccgtcgtccctgaacgagagccccgtcccgcaggagagcgagcgcttc
aacaagaagagccgcaagcggctggacagccggccggacgaggccaacgtgcccaccgtc
tccgagggccggtccaggaaggacgggcgcggcgggctccccgacttcaacagcctcatc
tccagccctcggctcgggagccgggagaagaagaagcccaaggggcagagggagcagccc
aacaagacgaagaagatgagccggacggccaacgagttccaggacagctcggagagcgag
ccggagctgttcatcagcggcgacgagctcatgaaccagaaccagagcagcaagaagagc
tggaagaacaagcgcagcctgcgcatggccagcgagctggaggagatcaagtgccgcaag
gccaacgagagggaggaccgcagcctcggcagccaggggttcgtctacgtcatggccaat
aagcagccgctgtggaacgaagccacgcaggtgtaccagctggatttcggcggccgagtc
actcaggagtcggccaagaattttcaaatagagctggacggtagacaggtgatgcagttt
gggcggatcgatggaaacgcctacatcttggatttccagtatcctttctcggcagtgcag
gcgttcgctgtggccttggccaacgtgacccagaggctgaagtga
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integrated database retrieval system
