Cololabis saira (Pacific saury): 133462774
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Entry
133462774 CDS
T09849
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133462774 (rtn1a)
03036 Chromosome and associated proteins [BR:
csai03036
]
133462774 (rtn1a)
Membrane trafficking [BR:
csai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133462774 (rtn1a)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133462774 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
133462774
NCBI-ProteinID:
XP_061600190
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All DBs
Position
16:22605942..22628933
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AA seq
737 aa
AA seq
DB search
MSAQPGEDLGSEGKWFGDDYERNGLFGSTPTRFDEFREEVKPRGGDAASDLDQQFLHLQP
DDGKRPPVAMETASTDESRSGLFNKPMNDDGDVYTSLLSNQSFTAERESSYLSDDLKPFS
HSSGPSPLDQFSSDPYSFSSNTKMTSNPMDDMPKPLLGSDKTESYNYMDISHGEEQHDQH
QGVLSSMVDKSPASHDLLGGYMDKNHGRDEEEEEEGENLGPALDSHSFPYVEEPSDEDLT
DYRSFHNLGGTPQTASPVKITLTESQPPAPKVELQKYPDPAVSTSERESVLSVGLQGVPT
VTLSEPEDDSPASTPNASPTQKEFPSGDTFKAEAEKPAVSKSSPDIKPGSREHDGSSAES
EDSEIELVSEEPPKASSNPFAEPPKSKGTSSQPNNPFDNPPVAKGGFSPAGSPAPPTAYS
ILREEREAELDSDLFIESASEESPKREQGASGPKQGVSPPSPLVPTSISPRSTSGAAPVE
PMITEKAKNPVKTEEDRANKPKPPTAAVPPEVRSEKSPQDDVHKPTNEGKGDLGKPAASV
FVLGLNKQKAIDLLYWRNVKQSGAVFSSMLLLLFSLTQFSVVSVGAYLALAALSATISFR
IYKSVLQAVQKTDEGHPFKAYLEIEIALSQDQISKYADKILLYSNTCMKELRRLFLVQDL
VDSLKFAVLMWLLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNS
VVGKIQAKIPGAKRKEE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaacccggcgaggacttaggctcggaggggaagtggttcggggatgactac
gagaggaacggcctgtttgggagcacgccgacccgttttgatgagtttcgtgaagaagtg
aagccgagaggcggagacgcagccagcgacctggatcaacaatttctccatttgcagccg
gacgacgggaaaaggcctcccgttgctatggaaactgcatctacagatgagtccaggtct
ggattgtttaacaaacccatgaatgacgatggtgatgtctacacttcgctgctgtccaat
cagagcttcacagctgaacgggaatcctcttacctgtctgatgacctgaagcctttcagc
cactcttctggcccgtctcccttggatcaattctcaagcgacccgtacagcttcagctcc
aacaccaagatgacttctaacccaatggatgacatgccaaaacccctgctgggctcagac
aagacagaatcatacaactacatggatatcagccacggggaagagcagcatgaccagcac
cagggggtcctgtccagcatggtggacaaaagcccagctagtcatgacttattgggcggg
tacatggataaaaaccatggaagagatgaagaggaggaggaggagggagaaaatctaggt
ccagcactggactctcactctttcccttatgtggaggaaccatctgatgaggacctgact
gactaccgctccttccataacctgggtggcaccccccagacggccagccctgtgaagatc
accctgaccgagtcccagcctccagctcccaaggttgagctgcaaaaatatcctgatcct
gcggtcagcacatctgaacgtgaaagtgtcctcagtgttggcttacagggggttcccacg
gtgacactatcagagccagaggatgacagcccagcctccactccaaatgcttcaccaaca
caaaaagaattcccatctggtgacacgttcaaggctgaagcagagaagcctgccgtctcc
aaaagcagtccagacataaagcctggcagcagagagcatgacggcagcagcgcagagtct
gaagactcggagatcgagctggtgtctgaagagcctcccaaggccagtagcaacccattt
gcagagccgcctaaaagcaagggcacttccagccagcctaacaacccctttgataatcct
ccagttgcaaagggtggtttcagccccgctggcagccctgctccacccacagcctacagc
atactgagggaggagagagaggcagagcttgatagtgatctcttcattgaatctgcatct
gaagaaagcccaaagagagagcagggtgcgagtggccccaaacagggagtcagcccacct
tctcctcttgttcccacctccatctctccccgcagcaccagtggagcagcgcccgttgag
cccatgatcactgaaaaggccaagaaccctgtgaaaacagaagaagatcgtgccaacaag
cctaagcccccaactgctgccgtgcctccagaggtgcgatcagaaaaatccccccaggat
gacgtgcacaaaccaaccaatgagggcaaaggagacttaggaaagcctgctgcatcagtc
ttcgtgctgggattgaataaacaaaaagcgattgatctcctctactggaggaatgtgaag
cagtcaggtgccgtgttcagcagcatgctcctgctcctcttctccctgacccagttcagc
gtggtcagtgttggagcatacctcgccctggcagctctctctgccaccatcagcttcagg
atctacaagtctgtccttcaggctgtgcagaagaccgatgaggggcatccattcaaagct
tacctggagattgaaatcgctttatctcaggaccagatttctaagtatgcggataaaatc
ctgttgtactccaacacttgtatgaaggagctccgcaggctgtttcttgttcaagatctg
gtcgactctttgaagtttgcagttctgatgtggctgctgacttacgtgggcgcgctcttc
aacggcctgacactgctcatcttagctgtggtctccatgttcaccatgcctgtggtctat
gagaaacatcaggcacagatcgatcagtatgtgggattaatacggacccaggtcaactct
gtagtgggaaagattcaggcaaagattcctggggccaagaggaaggaggagtaa
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