Cololabis saira (Pacific saury): 133462915
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Entry
133462915 CDS
T09849
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04814
Motor proteins
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133462915 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133462915 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133462915 (dctn1b)
03036 Chromosome and associated proteins [BR:
csai03036
]
133462915 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133462915 (dctn1b)
Membrane trafficking [BR:
csai04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
133462915 (dctn1b)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
133462915 (dctn1b)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
133462915 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
Motif
Other DBs
NCBI-GeneID:
133462915
NCBI-ProteinID:
XP_061600412
LinkDB
All DBs
Position
16:complement(8194400..8263477)
Genome browser
AA seq
1271 aa
AA seq
DB search
MSHTRRSTYTRTTSSGSSRMSSDGGGRPVKVGSLVEVIGKGQRGTVAYIGNTLFASGKWV
GVILDEAKGKNDGTVQGKRYFTCEEHHGIFVRQSQIQLVDDGADTTSPETPEPSAGKTLK
RELPETAKSTKMRGLKPKKTPAPRKTTARRPKQPSRPAGGKAAASGSASASAGEMSSSEP
STPAQTPLAAPVVPSLPSPGNPPAPVPSKEDVAMEAQEEEALRAQVKDLEEKLETLKIKR
TEDKAKLKELEKHKIQLEQLQEWKMKMQEQQAELQKQLKEAKREAKEALEAKEHYMEEMS
DTADAIEMATLDKEMAEERAESLQLEVDSLKERVDELTMDLEILKHEIEEKGSDGAASSY
HVKQLEEQNGRLKEALVRMRDLSASEKQEHVKLQKQMEKKNMELDTLRSQKEKLQEEMKA
AERTIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQENA
RETELELREMLDLGAARVREAEKRVEAAQETVADYQQTIQKYRELTAHLQEVNRELTSQQ
EASAELQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVGQANRHVSLLTSFMPESFLR
HGGDHDCILVLLLIPRLVCKAELISKQAQEKFDLNESCVERAGLKGGVGEQLSFAGGLVY
SLSLLQATLHKYEQALAQCSVEVYKKVGSLYPEMSVHERSLDFLIDLLHKDQLDETVNVE
PLTKAIKYYQHLYSIHLADHNEDCTMQLADHIRFTQSALDCMAVEVGRLRAFLHAGQEKA
DLAVLLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALTFGPQVSDTLSDCRKHLTWVV
AVLQEVAAAGAQMMSPLGEQEGLAALKLEDVAFKAGEQIYGSQGASPYDCLRQSCCIVIA
TMNKMATAMQEGEYDSDKPQSQNPPPVEVRAAALRAEITDAEGLGMKLEDRETVIKELKK
SLKIKGEELSEASVRLSLLEKKLDNSSRDADERVEKIQTRLDEAQTLLKKKEKEFEETMD
ALQADIDQLESEKAELKQRINNQSKMSGDGRGGGPAGIASLVTGMAGAELGSGVGSGSGL
HVMDSPLLAQQIQAQRLCIKRLKNDNNSLKAEKMRAQLASLPPLNVTKLPSREGRPEVLS
SALYRKTDQLLETLLQMSANVKVVDVTGKSPVTPGAQLLEQTARLQSLGETLERLKDEVA
EHIVNQQPGARVCSDFATFPSSSFVKAKEQKHGDTVLVGRVMMPCPRGQEQVHRLVLSQR
QLQTVHGLLQR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatactcggaggagcacatacacccggaccaccagcagtggcagcagcaggatg
agctcggacgggggcggccggcccgtcaaggtgggctctctggtggaggtgatcggcaaa
ggccagcgtggaaccgtggcctacatcggcaacacgctcttcgcatcggggaaatgggtg
ggggtcatcctggacgaggccaagggcaagaacgacggcacggtgcagggcaagcgctac
ttcacctgtgaagagcaccatgggatttttgtgagacagtcacagatccagctggtcgat
gatggagcggatacaacatctcctgagacacctgagcccagcgccggcaagaccctgaaa
cgagaactcccagagacggccaaatccaccaaaatgcgaggattaaagcccaaaaagact
cctgcaccccggaagaccacggccagacggcccaagcagccgagccgtcctgcaggaggg
aaagcggctgcgtccggctcagcgtcggcctcggcgggggagatgagcagcagcgagccc
agcacgccggcccagacccccctggctgctccggtggtccccagcctgccctccccggga
aaccctccagcccccgtccccagcaaggaagacgttgccatggaagcgcaggaggaggag
gcgctgcgtgctcaggtgaaggacctggaggagaagctggagacgctgaagataaagcgg
acggaggacaaagccaagctgaaggagctggagaagcacaagatccagctggagcagctg
caggagtggaagatgaagatgcaggagcagcaggccgagctgcagaaacagctgaaggag
gccaagagggaggccaaagaagccctggaggcaaaggagcactacatggaggagatgtcg
gacacagccgacgcaatcgagatggcaacgctggataaggagatggcagaggagagagcg
gagtccctgcagctggaggtggactccctgaaggagagggtggacgagctcaccatggac
ctggagatcctcaagcacgagatcgaggagaaaggctcggacggagctgcctccagctac
cacgtgaagcagctggaagagcagaacggccggctgaaggaagcactggtcaggatgcgg
gacctgtctgcatcggagaagcaggagcacgtgaagctgcagaagcagatggagaagaag
aacatggagctggacactctgaggagccagaaggagaagctgcaggaggagatgaaggcg
gcagagagaaccatcgatgagctgaaggagcaggtggatgcagctttaggggcggaggag
atggtggagactctgacggagaggaacctggacctggaggagaaagtcagggagctgaga
gagacggtcacggacctggaagccataaatgagatgaacgacgagctgcaggagaacgcc
agggagacggagctggagctgagagagatgttggatctgggagcggcgcgggtccgagag
gccgagaagagagtggaggcggctcaggagacggtggccgactaccagcagaccatccag
aagtaccgcgagctcacggcccacctgcaggaggtgaacagagagctgacgagccagcag
gaagcctcggcagagctgcagcagcagccgcccgcagagatgtttgatttcaagatcaag
ttcgcagagacgaaggcgtacgccaaggccattgagatggagctgaggaagatggaggtg
ggtcaggccaacagacacgtttccctcctgacctccttcatgcccgagtcgttccttcgc
cacggcggagaccacgactgcatcctggtgctgctgctcatcccccggctcgtctgcaag
gccgagctgatcagcaaacaggcgcaggagaagttcgacctgaatgaaagctgcgtggag
cgagcggggctgaagggcggtgtcggggagcagctgagcttcgccggaggactcgtctac
tcgctgagtctgctgcaggccacgctgcacaaatacgagcaagctctggctcagtgcagc
gtggaggtttataagaaggtcggctccttgtacccggagatgagcgtccatgagcggtcg
ctggacttcctcatagacctgctgcacaaagaccagctggacgagaccgtcaacgtggag
ccgctcaccaaggccatcaagtactaccagcacctgtacagcatccacctggcagaccat
aatgaagactgcaccatgcagctggctgatcacatcagatttacccagagtgccttggac
tgcatggcggtggaggtgggccgcctgcgggccttcctgcacgcggggcaggagaaggcg
gacctggccgtgctgctgaaggacctggagacgtcctgcagcgacatcaggcagttctgc
aagaaaatccgccgcaggatgccgggaaccgacgcccccggcatcccggccgcgctcacc
ttcgggccccaggtgtccgacaccctctccgactgcaggaaacacctgacctgggtggtg
gcggtgctgcaggaggtggcggccgccggggcccagatgatgtcccctctgggggagcag
gaggggctggcggccctcaagctggaggacgtggccttcaaggccggagaacagatctat
ggatctcagggtgccagcccctatgactgtctgcgacagtcctgctgtatcgtcatagca
accatgaacaagatggccacggccatgcaggagggagagtatgactcggacaagcctcag
agccagaatcctccgccggtggaggtcagggccgcggctctccgggcagagatcacagac
gcagaaggactgggcatgaagctggaggacagagagaccgtcatcaaggagctgaagaag
tccctgaagatcaagggggaggagctgagtgaagccagcgtccgactcagcctgctggaa
aagaagctggacaattcctcccgagacgcagacgagcgcgtggagaagatccagacccgg
ctggacgaggcccagactctgctgaagaagaaggagaaggagtttgaggagacgatggac
gccctgcaggccgacatcgaccagctggagtcggagaaggccgagctgaagcagaggatc
aacaaccagtccaagatgtctggggacgggcggggaggaggcccggcaggaatcgcttcc
ctggtcacggggatggcaggagccgagctgggctccggcgtgggctcgggttcaggcctg
cacgtcatggactctcctctgctggcgcagcagatccaggcccagagactctgcatcaag
cggctgaagaacgacaacaacagcctgaaggcagagaagatgcgtgctcagctggcctcc
ctgccgcccctcaacgtgaccaagctcccctccagggaggggcgtcccgaggtgctctct
agcgccctctaccgcaaaaccgaccagctgctggagacgctgctgcagatgagcgccaac
gtcaaggtcgtggacgtcaccggaaaatcccccgtgacccctggtgctcagctcctggag
cagacggcccggctccagtccctgggggagactctagaaaggctgaaggatgaagtggca
gagcacatcgtcaaccagcagccgggagcccgggtctgctccgacttcgccacgttccct
tcatcctcgttcgtgaaggcgaaggagcagaagcacggcgacacggtgctggtggggcgc
gtcatgatgccgtgcccccggggccaggagcaggtccaccgcctggtgctgtcccagcgg
cagctgcagacggtccacggtctcctgcagaggtag
DBGET
integrated database retrieval system