Cololabis saira (Pacific saury): 133462927
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Entry
133462927 CDS
T09849
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133462927 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133462927 (capn3a)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
133462927 (capn3a)
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C2: calpain family
133462927 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
PDC10_C
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
133462927
NCBI-ProteinID:
XP_061600443
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All DBs
Position
16:complement(8722841..8747633)
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AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFNGQDFCSLRQESVQRKNLFEDETFPASV
ESLGFKELGHKSNKVKNIVWKRPKEISDNPEFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYAGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELFKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKPSHHKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWVSLSKSEKEKLQHQNAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLMEEDDDADENEVGCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFSSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSENRNTSEEIENRIEADHPVPAPASAGEES
EEDQQFRTIFQEIAGDDMEITANELKNVLNRVISKHKDLNTEGFSLESCRSMIALMDMDG
TGRLNLQEFRHLWNKIKQWQGIFKHYNADQSGSINSYEMRNAVNDAGFRLNNQLYDIITM
RYANESMNIDFDSFVSCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctacactccgtctggctttttctgcgaccggctgatccgggaacgagaaaggagg
gacggggaagggtctttgagcaagccgctccgcttcaacggccaggacttctgcagcctg
agacaggagtccgttcagaggaagaacctgttcgaggatgagactttcccggccagcgtg
gagtcgctgggcttcaaagagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatctctgataaccccgagttcattgttggcggagccagtaggacg
gacatctgtcagggagacctgggtgactgctggctgctggctgctatcgcctgcctcact
ctgaacgagaaacttctgtaccgagtggttccccaggagcaaagcttctccgagggctat
gccggcatcttccacttccagttctggcgctatggtgactgggtggacgtggtcatcgac
gaccgcatccccactttcaacaaccagctggtcttcaccaagtcagcggagagaaatgag
ttctggagcgccctgctggagaaggcttatgccaagctgcacggctcttacgaggccctg
aagggaggaaacaccaccgaggccatggaggacttcaccggcggcgtcaccgagttttat
gagatgaaagaagctcccaaagagctgttcaagatcatgaaaaaagctctggaaagaggc
tcgctcatgggctgctccatcgattctctggttcctgctcgctttgaaactcgcacggtg
acgggacttgtgaagggtcacgcctactctgtgaccgcggtggaagagtgcaaaccgtcg
caccacaaggaatccaaggttcgtctggtgcgtctcaggaacccgtggggtcaggtggag
tggaacggcccctggagtgacaactcgaaggagtgggtctcactctccaagtctgaaaag
gagaaattgcaacaccaaaacgcggaagacggagagttctggatgtcattcgaggacttc
aagaagaactacaccaagattgagatctgcaacctcacgcctgatgctctggaggacgat
aagatccacaagtggacggtttctgtaaatgaaggccgctgggtgagaggctgctccgcc
ggaggctgcaggaactacccagacaccttctggaccaaccctcagtaccgccttcgtctg
atggaggaggacgacgacgccgatgaaaacgaggtgggctgcaccttcgtggtggcgctg
atgcagaagaacagacggaaagaacgcaagatgggagccaacctgttcaccatcggattc
gccatttatgaggtgccaaaggagatgcatggaaacaagcagcacatgcagaaggacttc
ttcctgttcagctcatccaaggcgcgctgcaagtcctacatcaacctgcgcgaggtgacc
cagcgcttccgcctgtcccccggcgagtacgtcatcattccctccacctacgagccgcac
caggagggcgagttcatcctgcgagtgttctctgaaaacaggaacacatcagaggagata
gagaacaggatcgaggcggaccacccagtgccggcgccagcgtcggcgggggaagagagt
gaggaggaccagcagttccgtactatttttcaggagatagccggtgatgacatggagatc
acagccaacgagttgaaaaacgtcctcaacagagtaatcagcaaacataaggacctgaac
acggagggcttcagcctggagagctgcaggagcatgattgctctgatggacatggacggg
acaggtagactcaacctgcaggagttcaggcatctgtggaacaagatcaagcagtggcag
ggaatctttaaacactacaacgccgaccagtccggtagcatcaacagttatgaaatgagg
aatgctgtcaacgatgcaggcttccgactcaacaaccagctctacgacatcatcaccatg
cgttacgccaacgagagcatgaacatcgacttcgacagcttcgtcagctgtctggttcgg
ctcgaagccatgttcagggcgttccaggccttcgatcaggatggagatggaaccatcaga
ctcagtgtcctggagtggctccagttgaccatgtacgcctag
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