Entry |
|
Name |
|
KO |
K05689 | cadherin 1, type 1, E-cadherin |
|
Organism |
csai Cololabis saira (Pacific saury)
|
Pathway |
csai05100 | Bacterial invasion of epithelial cells |
|
Brite |
KEGG Orthology (KO) [BR:csai00001]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
133463192
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133463192
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133463192
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133463192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:csai03036]
133463192
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:csai04515]
133463192
04090 CD molecules [BR:csai04090]
133463192
Chromosome and associated proteins [BR:csai03036]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
133463192
Cell adhesion molecules [BR:csai04515]
Cadherins
Major cadherins
133463192
CD molecules [BR:csai04090]
Proteins
133463192
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
17:39992491..40020148
|
AA seq |
901 aa
MGPARVAVWGVLIVVFQAWAQANTQEPSCAPGFQSDLLIFRVATKHLKQGTRLGRVGFTD
CTDRRIFLFSTDDSRFVVQTDGTLTVKRPVVLHDGGLDFFIRSWDSHGRRMSVPARVLHH
GHRHGNHHHGNHHHSVGHNHEHHLPQTEVSSNTNTEAPQVPILHFPKSSEGLKRRKRDWV
IPPLNVAENYRGDFPQKISQIKSNSDIIIFYSITGPGADQPPVNLFKMDRGTGNLYVTQQ
LDREKKSSYRLLAHAVSDGGGTAEEPMEITVIVIDQNDNNPIFNQSTYIGEVAEASKKDS
DVIQVFATDADDPATDNGVIRYSILDQDPKLPAGNMFAINPVTGVIRVNLEGLDREKFPR
YTLDVRAADTEGRGLSADTKVILKVTDSNDNAPVFTKPTYEAAVPENKVDEFVVTMSVTD
GDEPHSQAWNAVFKIIDGDPEGFFSVKTGTNKQEGIISTVKALDFEKTRKHTLLVAVENE
VPFVTPLTTATATVVVTVEDVNEAPIFEPQEKLVSKREDLVVGSPILTYTANDPDVAREQ
KVEYKMINDPAGWLSVARDTGLITVKSLMDRESLFVKDEVYRALIGAIDNDEVPATGTGT
LLIKLEDVNDNAPTIYERELNVCSKKPVPQLLTVIDKDGPTFSAPFDVSLPESTKANWTA
RMNGTKTGVLLTLTMDLPEGFYNVGMNVADHLGKSQLSTIKAHVCSCTGDEFRCVGRIAG
DDNLPVILGILGGVLLLLMLVLLLLLFARRRRVEKQEPLLQDDDIRDNIYYYDEEGGGED
DQDFDLSVLHRGLDNRPGVIRDDVAPTFLTAPRYRARPANPDEIGTFIDENLKAADNDPT
APPYDSLLVFDYEGGGSDAGSLSSLNSCSSGDQDYDCLADWGPRFKKLSDMYGGGEDDDM
L |
NT seq |
2706 nt +upstreamnt +downstreamnt
atgggccccgctcgggtcgcggtttggggcgttttaatcgtcgtttttcaggcctgggct
caagcgaacacacaggaaccatcatgtgcacctggattccagtcagacttgttgattttc
agagtggcgacaaagcacctgaagcaggggaccagactgggcagagttggcttcacagac
tgtacggatcgcaggatctttctcttcagcaccgacgacagccgcttcgtggtgcagact
gatggcactttaactgtaaaaagaccggttgttcttcacgatggtggactggacttcttc
atccgctcctgggattctcacggtcgcaggatgagtgttcctgccagggtcctgcaccat
ggccatcgccatggaaaccatcaccatggaaaccatcaccacagtgttggccacaaccac
gagcatcacctcccgcaaacggaggtttctagtaacacaaacaccgaagccccacaggtg
ccaatcctgcatttccctaagtccagtgaagggctgaagaggaggaagagagactgggtc
attcctccgctcaacgttgctgagaactaccgaggagactttccccaaaaaatctcccag
atcaaatccaactcagacataatcatcttctacagcatcactgggccgggagccgaccag
cctcccgtgaatctcttcaagatggaccggggcaccgggaatctgtacgtcactcagcag
ctggacagagagaagaaaagcagctacaggttgctagcgcacgccgtttcagatggcggc
gggactgcagaggagcccatggaaatcaccgtcattgtaattgaccagaatgacaacaac
cctatctttaatcagtccacctacatcggagaagtggccgaggcctcaaagaaagattct
gatgtgatccaggtttttgccaccgacgctgacgatccagcaactgacaacggagtgatc
cgctacagtattctagaccaggacccaaagctgcccgccggcaacatgtttgccatcaac
ccagtcaccggagtgatccgagtcaacctggaaggactggacagagagaaattccctcgg
tacacgctggacgtccgagcagcagacacggagggccggggcttgtctgcagacaccaag
gtcattctcaaggtgacggacagcaacgacaacgctcccgtcttcaccaagcccacgtac
gaagcagcggttccagagaacaaagtggacgagtttgttgttacgatgtcggtaaccgac
ggcgacgagccacactcccaagcctggaacgccgtattcaagatcatagacggagatccg
gaaggctttttctctgtgaagactggaaccaacaaacaagaaggaatcatcagtacggtc
aaggctctggacttcgagaagaccaggaagcacacgctgctggtggccgtggagaacgag
gtcccgttcgtgacgccgctgaccacggccaccgccacggtggtggtgaccgtggaagac
gtcaacgaagctcccatctttgaaccccaggagaagctcgtatccaaaagagaagacctt
gttgtcggcagccccatactgacgtacacggccaacgaccccgacgtagcccgggaacag
aaagtagagtataaaatgatcaacgacccggcaggctggctgagcgtcgccagggacacg
ggtctgatcacggtgaaaagcctcatggacagggagtccctcttcgtcaaagatgaagta
tacagagctctgattggtgctattgataacgatgaagttccagccacaggaacgggtact
ctcctcattaagctggaagacgtcaacgataacgcccccaccatttatgaaagggaactg
aatgtgtgcagcaagaagcccgtccctcaactgctcaccgtcatagacaaagatggcccg
accttcagtgctccgtttgacgtgagtctccccgagtcaaccaaggccaactggacggcg
aggatgaacggcaccaaaacgggggtcctcctgacgttgactatggacctgcctgaagga
ttctacaacgtggggatgaatgttgccgaccacctgggcaagagtcagctcagcaccatc
aaggcccacgtgtgcagctgcacaggagatgaattccgctgcgtagggaggattgcagga
gacgataacctgccggtcatcctgggaatactcgggggcgttctgctgctgctcatgctg
gtgctgctgctgctgctgtttgcaaggcggaggagagtggagaagcaggagccgctactg
caggatgacgacataagagacaacatctattactacgatgaagagggaggtggagaggac
gatcaggactttgatctgagcgtgctccaccggggtctggataaccggccgggggtgatc
cgggacgacgtggcccccacattcctaacggctccccgctaccgagcccgcccagccaac
cccgacgagatcggcaccttcatcgacgagaacctgaaggcggcagacaacgacccgacg
gcgcctccgtacgactccctgctggtgttcgactacgagggcggcggctccgacgcagga
agcctgtcctccctgaactcctgcagcagcggagaccaggactacgactgcctggccgac
tgggggccgcgcttcaagaagctgtccgacatgtacggaggaggggaggacgacgacatg
ctgtga |