Cololabis saira (Pacific saury): 133463218
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Entry
133463218 CDS
T09849
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03430
Mismatch repair
csai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133463218 (mlh1)
03460 Fanconi anemia pathway
133463218 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133463218 (mlh1)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
133463218 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
133463218
NCBI-ProteinID:
XP_061600594
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Position
17:complement(12140272..12156412)
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AA seq
737 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKSTNIQVTAKEGGLKLLQIQD
NGTGIRREDMEIVCERFTTSKLQTFEDLSSIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPSDEYSRIVEVVSRY
AIHNSGKGFSVKKQGETVADVRTLANASVVDNIRSIFGNAVSRELIEVGCEDQKLAFKMK
GYVSNANYSMKKCILVLFINHRLVESSALKKAVETVYAAYLPKNTHPFLYLSLEISPQNV
DVNVHPTKHEVHFLHEDSVIESVQKHVESKLLGSNSSRTYFTQTLLPGLSVSGGPEVKAS
SSAAESTERVYAHQMVRTDCRAQKLDAFLQPREKPTSDPEPSGPSSEEAAPKTLELEDVD
DAEMLEILDTEEVQGPRDGEDGSGAAQDVQRKRPRKDEQQQQQQQEEQEEEGGENLTAAA
TPKRRTIKLTSVKELRDEISDNSHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNATK
LSQDLFYQILVYDFGNFGVLRLSTPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDF
LKKKAEMMGDYFSVEVDQDGNLTGLPLLLDKYTPVMEGLPMFILRLATEVNWDNEKDCFR
DFSRECSAFYSIRKQLILEAEPGEEQGAEVNSWRWKVEHVIFKALRTLYSPPKSFGEDGS
VLQIANLPDLYKVFERC
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagttatccggaggctcgacgagactgttgtgaaccggatcgctgcaggagaa
gttatccagcgtcctgccaacgctgtcaaagaaatgattgaaaactgtctggatgcaaag
tccaccaacatccaggtgacagccaaagaaggcggactgaagctcctgcagatccaggac
aacggcaccggaatcaggagggaagatatggaaatagtttgtgaaaggtttaccaccagc
aaactgcagacctttgaggatctttcaagcattgcaacctatggattcagaggagaggcc
cttgccagcataagccatgtggcacatgttaccataacaaccaagacagctgatgccaag
tgtgcttatagagccagttacagcgacggcaaactgaaaggcccccccaaaccatgcgct
ggaaaccaggggacgcagatcctggtggaagaccttttctacaacgtgtccaccaggagg
aaagctctgaagagccccagcgatgagtactccaggatcgtagaagtggtcagcaggtat
gccatacacaactcaggaaaaggtttttctgttaaaaagcaaggagagacggtggcagac
gtgaggacgctggccaacgcgtccgtcgtggacaacatccgtagcatcttcggcaacgca
gtcagcagggagctgatcgaagtcggctgcgaagatcagaagctggcgtttaagatgaaa
ggctacgtctccaacgcaaactactccatgaagaaatgcatcctggtcctcttcattaac
caccgcctggtggaatcgagtgctttgaagaaagcggttgagacggtttacgctgcatac
ctccccaagaacacacatccgttcctgtacctcagcttggaaatctcacctcagaatgtg
gacgtgaatgttcaccccacgaaacacgaagtgcacttcctgcatgaggacagcgtcatc
gagagcgttcagaaacacgttgagagtaaactcctgggctccaactcttcacgcacgtat
ttcactcagactttgctgccgggtctgtcggtgtccggtggcccggaggtgaaggcctcc
agctccgcggcagagtccaccgagcgggtctacgcgcaccagatggtgaggaccgactgt
cgcgcccagaagctggacgccttcctccagcccagagagaagccgacgtcggaccccgag
ccatctggtcccagcagcgaggaggcggcacccaaaaccctggagctggaggacgtggat
gatgcagagatgctggagatcttggatacagaggaagtgcaggggcccagagacggcgag
gacggcagtggagctgcgcaggatgttcaaaggaagcggccgaggaaagacgagcagcag
cagcagcagcagcaggaggagcaggaggaggagggaggagagaacctgacggctgcagcg
acgcccaagcggcgaaccatcaaactgaccagcgtgaaggagctgagagacgagatcagc
gacaactcgcacaaaggtctacaggaaatgctgcagaaccactcgttcgtgggctgcgtt
aatccccagtggactttgatccaacaccacaccaaactgtacctgctcaacgccaccaag
ctcagccaggaccttttctaccaaatactcgtgtacgacttcgggaacttcggcgtgctc
cgtctgtcgacgccggcgcctctgtatgacctggccatgttggcgttggattctgaggag
agcggctggaccgaggaggacggtcccaaggagggtctggctcagtacatcgtggacttc
ctgaagaagaaggctgaaatgatgggggattacttttccgtggaagtagatcaggacggg
aatctgaccggcctgccgctcctcctggacaaatacacccccgtcatggagggtctgccc
atgttcatcctgcggctcgccaccgaggtgaactgggacaacgagaaggattgcttcagg
gacttcagccgggagtgcagcgccttctactccatcaggaagcagctcatcctggaggcc
gagcccggggaggaacagggtgccgaggtgaattcttggcgctggaaagtcgagcacgtc
attttcaaagctcttcggaccctctactctcctccaaagagcttcggcgaggacggctcc
gtgctgcagatcgcaaacctgccggatctttataaagtctttgagcggtgctga
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