Cololabis saira (Pacific saury): 133463299
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Entry
133463299 CDS
T09849
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133463299 (six2a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
133463299 (six2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
133463299
NCBI-ProteinID:
XP_061600746
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Position
17:complement(27223958..27227654)
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AA seq
290 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSLHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLTSSMNGNKSLLGSSDDEKTPSGTPDHHTSQSPALLLGPS
SGLPGLHGLAPPPGPSAVPVPGGAEPHHHHTLHHDSILNPMSSNLVDLGS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcttccgacgtttggttttacgcaagaacaagtggcgtgtgtgtgcgaggtc
ctccagcaaggggggaacatcgagcggctggggcgcttcctctggtcgctgccggcgtgc
gaacacctccacaaaaacgagagcgtgctcaaggcgaaagccgtggtcgccttccaccgg
gggaacttccgagagctgtacaagatcctggagagccaccagttctcgctgcacaaccac
ccgaagctgcagcagctgtggctcaaggcgcactacatcgaggcggagaagctgcgcggc
cggccgctcggagccgtggggaagtaccgggtccggaggaagttccccctgccccgctcc
atctgggacggagaggagaccagctactgcttcaaggagaagagccggagcgtgctgcgg
gagtggtacacccacaacccctacccgtccccgcgggagaagagagagctggccgaggcc
acgggactcacgaccacacaggtcagcaactggttcaaaaaccgacggcagcgagaccga
gcagctgaagccaaagaaagagaaaacaacgagaactccaacagcaatagtcacaaccca
ctgacttcttccatgaatggaaataaatctctattggggagctcggacgacgaaaagacg
ccctcggggactccggatcatcacacgtcccagagcccggctctgctgctcggcccgagc
agcggtttaccggggctgcacggcctggcgcccccgccgggccccagcgccgtcccggtg
cccggcggcgcggagccgcaccaccaccacacgctgcaccacgactccatactgaaccct
atgtcttcgaatctagtggaccttggctcttaa
DBGET
integrated database retrieval system