Cololabis saira (Pacific saury): 133463305
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Entry
133463305 CDS
T09849
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133463305 (btaf1)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133463305 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_Maestro
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
133463305
NCBI-ProteinID:
XP_061600764
LinkDB
All DBs
Position
17:18637159..18685755
Genome browser
AA seq
1864 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLIKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWKPAPKVEQESCEDLSPEDSSCDRLTFYHFDISRLLKHGASLLGS
AGAEFELQDDKTAEMDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDYSCQPN
NLKGPGIKATAGCSSRNHVTIQAAELIDSEFRPGMSSRQKNKAKRMAKLVAKQRSRDMDP
NEKSNDSFEGEPEEKRRKTTNVVIDQPATQNKVLIDNVPDNSSLDEIQEWPLESFCEELC
NDLFNPSWEVRHGAGTGLREIIKSHGADGGKLVGSTGKQMSRQHQEWIEDLVIRLLCVFA
LDRFGDFVSDEVVAPVRETCAQTLGVALRHMNETGVSMTVDVLLKLLKEDQWEVRHGGLL
GIKYALAVRQDLITVLLPRVLPAVTEGLQDLDDDVRAVAASSLIPVVDGLVKLLTSKVRG
QTSSPQCDVPFIVNTLWDALLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVP
RVWPFLRHTISSVRRAALETLYTLLSKADQSCAMWINPILQDMLRHIFQSCILESNEDIL
ELIHKVWMELLSQAPHQYVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARCKDKAGT
KARLGNNQVKETMQEYIAGAETVTDDPVTRDYVVIRARLMSAKLLGALCRCICDPQLNAA
SQEIRPAESLGQLLLFHLNSKSALQRIAVSLVLCEWAAQQKDCPVVSSMVQPRLLAILTE
HLYYDEIAIPFTRMQNECKQLIALLAEAQIDVEDRVNCSVFTIDQANELVTTIFSESTAS
LNTKCKTWQGLDGKRQQAQSTVTETNGEWQQLHLRVHMFTACAVINLQVLPDKLNPLVRP
LMEAVKREENTLIQSYAASFIAKLLRQCSGRSPCPNPKIIKNLCSSACVDSAVTPSSACP
VPPTHDDVKGCGMERDGMHHMVNKTRGIITLYRHQRAAFAITSKRGPAPKAPKTPTTELP
PGSTIGPDNDESKKPFLIQRRGAEFSLTTIARHFGANLTKSLPYLWENTVGPLRTAVSDD
HCIDREAQLERGDAAAQELVSSLQVLEVMAGAMAAELRHSLLEHLPHLFTCLQHPYTAVR
HMAARCVGALSKIATLETMNSFLERVLPWLAAIDDCTKQEGAIEALACVMEQLDVDIVPY
IVLLVVPVLGRMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERNF
LEQLLDGRKLENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSIC
ILAGDTYLRAQEYSKTKASDCSPMPSLVVCPPTLTGHWVDEVGKFCSKEFLNPLHYTGPP
TERMRLQHQVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAMKQL
AANFRVILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQE
AGVLAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKAS
VDDSISMASGDEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTSQHPEYKHITEQLAGQN
TSLRDIQHAPKLSALKQLLLDCGLGGGGGSEGGTESVVAQHRVLIFCQLKSMLDIVEHDL
LKPKLPTVTYLRLDGSVPAGQRHAIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFV
EHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVINQENT
SLQSMGTDQLLNLFTLDQGGKGERGEPSSGKGSMKSVLDGLGELWDQQQYESEYDLDTFM
HSLQ
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcgagacttgatcgtttgtttatcctcctggacaccgggacgacaccagtc
accagaaaagcagccgcccagcagctcggagaagtcgtcaaacttcacccacacgagctc
aacaacctattaatcaaggttttgacgtatctacggagccccaactgggacactcggatt
gcagcgggccaagccgtggaagccatcgtgaagaatattcctgagtggaaaccagcaccc
aaggtcgaacaagagtcttgcgaggatctgtctccagaggactcgtcttgtgaccggctg
accttttaccactttgacatctcccgtctgctcaaacacggggcgtctttgctgggatct
gctggggccgagtttgagctccaggatgacaaaacagctgaaatggacccgaaggaacgt
ctcgcgcgccagaggaaactcctccagaagaaactgggcctggacatgggagctgctatt
ggaatggacacggaggaactgttcaacgacgaggatttagattattcctgtcaaccaaat
aatctgaaaggcccaggaatcaaagccacagccggctgcagctcccgcaaccacgtgacc
attcaagctgctgagctgatcgactccgagttccggcccggcatgagcagtcgtcagaag
aataaagccaagaggatggctaagttagtggctaaacaaagatctcgggacatggatccc
aatgaaaagagtaatgacagttttgaaggtgaacccgaggagaagcgaaggaaaacaacc
aacgtagttatcgaccagccagctacgcagaataaagtcttaattgataacgttcctgat
aactccagtctggacgagatccaagaatggccgttagagagtttctgtgaagaactctgc
aacgacctcttcaatccttcatgggaggttcgtcacggtgccggcaccggtctgagagaa
atcatcaagtctcacggagccgacggcgggaagctggtgggaagcacggggaaacagatg
tcgcgacagcatcaggaatggatagaagatctggtcatccgtctcctgtgtgtctttgct
ttggatcgttttggtgattttgtatctgacgaggtggtggctccggtcagggaaacgtgt
gcccagacgctcggcgtggcgctgcgccacatgaacgagacgggtgtttctatgacggtg
gacgttttactgaagctgctgaaggaggatcagtgggaggtccgacatggaggtttactg
gggatcaagtacgccctggccgtccggcaggacctgatcaccgtcctgctgccccgggtt
ctccctgccgtcaccgagggcctgcaggacctggacgacgacgtccgggccgtggcagct
tcatctctgatccccgtggtggacggactggtgaagcttctgaccagcaaggttcgggga
cagactagttctcctcagtgtgatgtccccttcatcgttaacacactctgggacgctttg
ttggacctggacgacctgaccgcctccaccaacagcatcatgacgctgttgtcctcgttg
ctgacgtatccacaggtccggcagtgcagtatgcagcagtccctgactgtcctcgttcct
cgggtttggccgttcttgagacacacgatatcgtcggtaagaagagcagcgctggaaacc
ctttacaccctgctgtccaaagctgaccagagttgtgccatgtggattaatcccatttta
caagacatgctgcgccacatctttcagtcctgtattctggagagcaacgaggatattctt
gaactgatacataaggtgtggatggagctgctgtctcaggccccccaccagtacgtggtt
gcagccagctgtccctggatgggagcctggctgtgtctcatgatgcaggcgtcccacatc
cccatagacctgaacatgctgctggaggtcaaggcccgctgcaaggataaggccggtaca
aaagcgcgtctaggcaacaatcaggtgaaggaaacgatgcaggaatacatagcgggtgct
gagactgtgacggacgacccggtgacgagggattacgtcgtgatccgagctcgactcatg
tctgccaagctgctgggggcgttgtgtcgctgcatctgcgacccgcagctcaacgctgcg
tctcaggagatccggccggccgagtctctgggccagctgctgctcttccacctcaactcc
aagtcggcgctgcagcgcatcgccgtgtccctggtgctgtgtgagtgggcggctcagcag
aaggattgtccggtggtgtcgtccatggtgcagcctcgtctcctggccatcctgacagaa
cacttgtactacgatgagatcgccatccccttcacgcgcatgcagaacgagtgcaaacag
ctgattgctctgctggccgaggctcagatagacgtggaagatcgagtcaactgctctgtt
ttcaccatcgaccaggccaacgagttggtaaccaccatcttcagcgagtcgacggcgagt
ctgaacacgaagtgtaagacgtggcagggcctggacgggaagcgtcagcaggcccagtcc
acggtgactgagaccaacggggagtggcagcagctgcacctgcgggtgcacatgttcacg
gcgtgcgccgtgatcaacctgcaggtgctgccggacaagctgaacccgctggtgcggccg
ctgatggaggccgtgaagagggaggagaacacgctgatccagagctacgccgcctccttc
atcgccaagctgctgcgtcagtgctccggccgctcgccgtgtcctaaccctaaaatcatc
aagaacctctgcagctcggcctgcgtggactcggccgtcacgccctcgtccgcctgcccc
gttcccccgacacacgacgacgtcaaaggttgtgggatggagagagacgggatgcaccac
atggtcaacaaaacccgaggaatcatcaccctgtaccggcaccagagagctgcgtttgcc
atcaccagtaaacgaggacccgcccctaaagcccccaagaccccgacgacagagctgccg
cccggcagcaccatcggccccgacaacgacgagagcaagaagccgttcctcatccagcgc
cgcggggccgagttctccctgacgacgatcgcccggcacttcggggcaaacctgaccaag
agtcttccgtatctgtgggagaacacggtgggaccgctgaggacggccgtgtcggacgat
cactgcatcgaccgggaggcccagctggagagaggagacgctgcagcgcaggaactagtc
agttctctgcaggtattggaggtgatggctggagccatggctgctgaactcagacactcg
ctcctggagcacctacctcacctgttcacctgcctgcagcacccgtacacggcggtacga
cacatggcagctcgctgcgtcggggctttgagtaagatcgccacgctggagaccatgaac
agtttcctggagagagttctgccctggttagctgcgattgatgactgcaccaaacaggaa
ggagccatcgaagccttagcctgcgtgatggagcagctggacgtggacatcgtcccctac
atcgtgctgctggtcgtcccggtgctgggacggatgagcgaccccagcgacagcatccgc
ttcatggccacgcagtgtttcgctacgctgatccgtctgctccccctggaggccgggatt
ccagaccctcccgccatgtctgccgacctgattcgacaaaaagccagagagcgtaatttc
ctggaacagctgttggacggtagaaagttggagaactacaagattcccgtgccgattaag
gcggagctgcggaaatatcagcaggacggagtgaactggctgtcgttcctgaacaaatac
aagctgcacgggatcctgtgtgacgacatgggcctggggaagacgctgcagtccatctgt
attctggcaggagatacctacctcagggcacaggaatactccaagacgaaggcgagtgac
tgcagccccatgccgtctctggtggtttgtcctcccaccctgacgggtcactgggtggat
gaagtgggaaaattctgttccaaagaattcctcaacccgctgcattacaccgggccgccc
acggaacggatgaggttgcaacaccaagttaaaaagcacaatctcgtagtcgcctcttat
gacgtcgtacggaacgacatagacttctttagaaatatcaaatttaactactgtatcctg
gacgagggtcacgtcatcaagaatgggaaaaccaaactttccaaagccatgaaacagtta
gctgcaaacttcagagtcatcctatcaggaacaccgatccagaacaacgtcctggagctc
tggtcgttgtttgacttcctcatgccgggctttctgggaacggagcgacagtttgctgct
cggtatggaaaacccatcctggccagcagagacgccaagagctcgtcgagggaacaggag
gccggagtcctggcgatggaagcgttgcaccggcaggtgctgccgttcctcctgaggagg
atgaaggaggacgtcctgcaggacctgccacccaaaataattcaggattattactgcaac
ctgagccctctgcaggttcagctgtacgaagactttgccaagtcccgagccaaggccagc
gtggacgacagcatctccatggcgtctggagacgaggaggagaaacccaaacttaaagcc
acaggccacgtcttccaggcgctgcagtatctgcgtaaactctgcaaccatcccagcctg
gtgttgacgtcgcagcatccggagtacaaacacatcacggagcagctggcgggacagaac
accagtctgagagacatccagcacgcacccaagctctccgccctcaaacagctgctgctg
gactgtggtctgggagggggtggaggatctgagggcggtactgagtccgtggttgcccag
caccgggtcctgatcttctgtcagctgaagagcatgctggacatcgtagaacacgacctg
ctgaagcccaaactccccacggtgacgtacctgcgtctggacggcagcgtgccggccggc
cagcgccacgccatcgtgtccaggttcaacaacgacccgtccatcgacgtgctgctcctc
accacccacgtgggcgggctgggtttaaatctgaccggagccgacaccgtggtgtttgtg
gaacacgactggaaccccatgagggacctgcaggccatggaccgagctcaccggatagga
cagaaacgagtggtgaacgtgtaccggctgatcaccagaggaactctggaggagaagatc
atgggactgcagaagtttaagatgagcatcgctaacaccgtcatcaaccaggagaacacc
agtctgcagagcatggggacggaccagctgctcaacctgttcacgctggaccagggcggt
aaaggcgagcggggcgagccgtcgtcggggaaaggctccatgaagtcggtgctggacggg
ctgggggagctgtgggaccagcagcagtacgagtccgagtacgacctggacacgttcatg
cactcgctgcagtaa
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integrated database retrieval system
