Cololabis saira (Pacific saury): 133463390
Help
Entry
133463390 CDS
T09849
Symbol
ikzf1
Name
(RefSeq) DNA-binding protein Ikaros isoform X1
KO
K09220
IKAROS family zinc finger protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133463390 (ikzf1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133463390 (ikzf1)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133463390 (ikzf1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133463390 (ikzf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
CPSF100_C
zf-C2H2_11
zf-C2H2_REST
GAGA
Motif
Other DBs
NCBI-GeneID:
133463390
NCBI-ProteinID:
XP_061600894
LinkDB
All DBs
Position
17:15183448..15206679
Genome browser
AA seq
635 aa
AA seq
DB search
MVHSPRSPHPISCMAASDGLLGVRFYWHGTKQVPRVRWPELSPLQPVDKSEQNAPALLRD
IVMLGWNEEVQWRGEGLRAQLHGAAAALRPSAHGAGESWKNFILQTQGIAEYLHRMETEE
AQEMAQMPGRDSPPINDASEETEEPMAVPEDLSAGSAHQQNNRGDKACNIKVEARSDEEN
GLACDMMNGVEEEECAEDLRVVDASGAKVNGSQPSPEAKAFSTAGGIRLPNGKLKCDICG
IVCIGPNVLMVHKRSHTGERPFQCSQCGASFTQKGNLLRHIKLHSGEKPFKCHLCSYACR
RRDALTGHLRTHSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQYMGGGVYTVVKEESN
QNEQREDLSQTGSDRALVLDRLANNVAKRKSTMPQKFVGDKRLSDLSYDGGPGELIQPHV
IDQAINSAISYLGAESLRPLVQTSPASSSDVGLSSIYALHKPPSEGLAGLAGNPMSAKDT
AAENLLLLSNSKSASSEKDGSPSHSGHDSTDTESNNEDRPGGASGGLIYLTNHMTSGGRN
GVLPLVKEEQQRQYNAVRAGMEMASGGFKVLTSDGEQVREYLCEHCRVLFLDHVMYTIHM
GCHGFRDPFECNLCGHRSQDRYEFSSHITRGEHRY
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtccactctcctcgctcgcctcatcccatctcatgcatggctgccagtgatggtcta
ctgggtgttcgcttttattggcacggcacaaagcaagtgccaagggttcggtggcccgaa
ctctccccgctgcagcctgtggataaaagcgagcaaaatgccccagccctgctcagagac
atagtcatgctgggctggaacgaggaagtgcagtggagaggggagggactccgggcgcag
ctccatggggccgccgcggcgctgcgaccttctgcacatggagccggggagagttggaag
aacttcatactgcaaactcaaggaatagcagagtacctgcaccgcatggagacggaggag
gcccaggaaatggcccagatgccaggcagggacagcccccccatcaacgatgcatccgag
gaaacagaggagcccatggccgtccccgaggacctgtcagccggctccgcccaccagcag
aacaaccggggggacaaagcctgtaatattaaagttgaggctcgcagtgatgaggagaat
gggctggcctgtgacatgatgaatggcgtggaggaggaggagtgcgcggaagacttgcgc
gtggtcgatgcctcgggggccaaggtgaacggctcacagccgagccccgaagccaaggcc
ttctccacagctggcggtatccggctgcccaacgggaagctcaagtgtgatatctgtggg
atagtttgcattggtcccaatgtgttgatggtgcacaagcgaagccacaccggagaacga
ccgttccagtgcagccagtgcggcgcctccttcacccagaagggcaacctgctgcgtcac
atcaagctgcactcgggagagaagcccttcaagtgtcacctgtgcagctacgcctgtcgc
aggagggacgccctcaccggccacctgcgcacgcactcggttggaaaaccccacaagtgc
gcctactgcgggcgcagctacaagcagcgcagctctctggaggagcacaaggagcggtgt
cacaactacctccagtacatggggggcggcgtctacacagtagtaaaggaagaaagcaac
cagaatgagcagagggaagacttaagccagacgggatctgacagagccttggtgctagac
agactagctaataatgtagctaaacgtaagagcactatgccacagaagtttgtgggagac
aagcgtctgtccgatctgtcgtacgacggcggccctggcgagctgatccagccccacgtc
atcgaccaggccatcaacagcgccatcagctacctgggggccgagtccttgcggcccctg
gtccagacctccccggcctcctcctccgacgtgggcctcagctccatctacgccctgcac
aaaccgccgtccgagggcctggcgggcctcgcggggaaccccatgtcggccaaagacacg
gcggccgagaacctgctgctgctctccaactccaagtcggcctccagcgagaaggacggc
tcgcccagccacagcggccacgactccacggacacggagagcaacaacgaggaccggccc
gggggggcgtccggcggcctcatctacctgaccaaccacatgacctcgggggggaggaac
ggcgtgctgcccctggtgaaggaggagcagcagcggcagtacaacgccgtccgggccggc
atggagatggcgtccgggggcttcaaggtgctgacctcggacggggagcaggtgagggag
tacctgtgcgaacactgccgcgtgctcttcctggaccacgtcatgtacaccatccacatg
ggctgccacggcttcagggaccccttcgagtgcaacctctgcggccaccggagccaggac
cgatacgagttctcctctcacataacccggggagagcatcgctactga
DBGET
integrated database retrieval system
