Cololabis saira (Pacific saury): 133463462
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Entry
133463462 CDS
T09849
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133463462 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133463462 (ercc6)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133463462 (ercc6)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
133463462 (ercc6)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
133463462 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Pneumovirus_M2
Neugrin
Motif
Other DBs
NCBI-GeneID:
133463462
NCBI-ProteinID:
XP_061600997
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All DBs
Position
17:complement(4167228..4184803)
Genome browser
AA seq
1457 aa
AA seq
DB search
MPVEGPELEASSALSSPASAALTPGGSEEDGAAARGTAVCSFPENGQDSEAAAAYPGNTG
PEDSNNAGKRSGALLQIDRQRIQAASASSGADELQGLGVAVYDQDVLEQGVLQQVDEAIQ
GASQAAAKAEAEKEYESVLDDVRSVTTSLKHINKIIEQLSPYAGSSKDISRKIESVKRQK
ENKEKQLKKVRAKQKRLQAILGGEDTQRVEAELLAEDDGEEEPGPSTLGSMLMPVQETEW
EELIRKGHMTPFGTQIQQKEVKKEPRKLMLAENSAFDMYLADQAKIATDRKKGLLQNKKR
SSARSPNEEASSKTKKKHLSSTDGKLKKRSRKLQITALKAHPKARPKTEPKLPKPRRKRH
TEGEETGSEGSEYLPSDEGIDFDQEEREAMEEGLGEMNDDSEYELKPYKKKPGHRRREKI
KKEQSDEEYSPESSDEEDDDAESKAKKCKDDGDVEYYRQRIRKWKRQRLREREEKRERDE
ELTDDSDVEFDAGFKVPGFLWKKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVI
CFLAGLSYSKVRTRGSNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSF
SSNKEKLIPEIASCHGILITSYSAVRNLQDVLQRYDWHYIILDEGHKIRNPNAGVTKACK
QFRTPHRFILSGSPMQNNLKELWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQ
VQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQSFLDSK
EVYQILNGDMQVFSGLIALRKICNHPDLFSGGPRILRGIPEEQLTEEEQFGFWKRSGKLM
VVESLLRLWFKQGHRILLFTQSRQMLHILEVFVRENNYSYMKMDGTTPIGSRQPLIARYN
EDKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRL
LTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDVYELFTLADPGGGQGTETSALF
AGTGSDVKVPKKSERPRPSYTVNLKGSHVQKPSSPSRVETGADRRHSSSEDIRTLGDCST
SSSNTNTQVKSNVLMDRESTNQDDMIVVPNISANTLPPGQNNKDSDTAMPVVKNVQSPGY
HHHRDKDPTLTSPQKHREKRKHCDSADMEKHKHKRCKHSRGARLEGHRISYLVKKRTGRK
TESEETAAEDQKKSDDYVLAKLFKKSGIHSVMQHDTIMESSNPDYVLVEAEANRVARDAL
KALKISRQQCRLPYNSTVPPPARKRFGQKKNSILVQPAGQSAPTPIKCKDIAIVKKSVSK
KPGAGAHFSGEVPDTESNSASLSSSSLLAKMRARNHLSKPSTQREDEAEEEDGSPAARTT
SPPPATVHDELLVDLRNFVAFQASVDGQATTQEVLEYFKPRLTQEQAPVFRELLRTICDF
HRTSGQEGTWRLKQSYR
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgaaggtccggagctcgaggcgtcctcggcgctctccagcccggccagcgct
gctctcacccctggagggtccgaggaggacggagctgccgcccggggcacagcagtctgc
tccttccctgaaaacggccaggactccgaggcagctgcagcctatcctggcaacaccggg
cccgaggacagcaacaatgctggcaagaggtctggagcgttgctgcagatcgaccgacag
cgcatccaagctgcgtctgccagttctggagctgatgaactccagggccttggtgtggct
gtgtacgaccaggacgtcctcgagcagggtgttctgcagcaagtagacgaagccatccag
ggggctagtcaggctgctgcaaaagcagaagctgagaaggagtacgagtctgtgctggat
gatgtgaggtctgtcacaacatctctgaaacatatcaacaagattattgagcagctgtct
ccctatgcaggctccagcaaagatatcagtaggaagatcgaatctgtcaaacgacagaaa
gaaaataaggaaaagcagctgaagaaagtgagagcaaaacagaagcgacttcaggccatc
ttgggaggagaggacactcaaagagtggaagctgaacttttggcagaagatgatggagag
gaagaaccgggaccatccacgcttggcagcatgctcatgcctgttcaggagactgaatgg
gaggagcttattcggaaaggtcacatgactccttttggaacccaaatccagcagaaggag
gtaaagaaagaaccccgaaagctgatgctggctgagaattctgccttcgacatgtacttg
gcggaccaggccaagattgccactgataggaagaaaggattacttcagaacaagaaaaga
agttctgctcgtagccctaatgaagaagctagcagtaaaacaaaaaaaaaacatctctca
tctacggacggaaagctgaagaaacgttcgagaaagctgcagataactgctctgaaggcc
catcccaaggctcgacctaagactgagccaaagctccctaaaccaaggaggaagaggcac
actgagggagaggagacaggcagtgaggggtcagagtacctgcccagtgatgaaggaata
gattttgaccaagaggagagagaagccatggaagagggtttgggggagatgaatgatgat
agcgaatatgaattgaaaccatacaagaaaaaacctgggcacagaaggagggagaagatt
aagaaagaacaaagtgacgaagaatacagccctgaaagttcagatgaagaagatgatgat
gctgaaagtaaagccaaaaaatgcaaagatgatggagatgtggagtactacaggcaacga
ataaggaaatggaaacggcagcgacttcgggaacgggaggagaagagagaaagagatgag
gagcttacagatgacagtgatgttgaatttgatgcaggcttcaaagttcctggtttcctc
tggaaaaaacttttcaaataccagcagacaggtgtgcgatggatgtgggaactccactgt
cagcaggccggtggcatcctgggagatgagatgggattgggtaaaaccatccaggtcatc
tgttttctggctgggctaagctacagcaaagttaggacaagggggtccaactacaggtat
gttggtttgggtccaacagttattgtctgccctgctacggtcatgcaccagtgggtgaaa
gagtttcacacctggtggcctcccttcagagtggcagttctacatgaaacgggctcattc
agcagcaacaaggaaaagctgattccagaaatagcatcatgccatggtattctgatcact
tcatattcagctgtgagaaatttgcaagacgtcctgcagcgctatgactggcactacatt
atactggatgaaggtcataagattagaaacccaaatgctggagttaccaaggcctgcaaa
cagtttcgcactcctcacaggttcatcctgtcaggttcccctatgcagaacaatttgaag
gagctgtggtctctgtttgactttaccttccctggtaaactggggacattgcctgtcttc
atggagcagttctctgtgccaattactatgggaggatacagcaatgcatcgcctgtacag
gtccagacggcctttaagtgtgcatgtgtgctgagggacaccatcaatccttatctgctc
agaagaatgaaggcagacgtcaaggccaacctctctttgcctgataaaaatgaacaggtg
ctgttttgcagattaacagaggatcagcggcaggtgtatcagagtttcttggattccaaa
gaggtctaccaaatactaaatggtgatatgcaggtattctcagggttgattgcactgcgg
aagatttgtaaccacccggaccttttctcaggtggcccacggatactgagaggaatccct
gaggagcagctaactgaggaggaacaatttggcttttggaaacgctcgggaaagctgatg
gtggtggagtcactgctgcgtctttggttcaaacagggccacaggatcttgctcttcact
caatctagacagatgctgcacatcttggaggtgtttgtaagagaaaataactactcatac
atgaaaatggatggcacaaccccaatcggttccagacagcctctcatcgctcgctacaat
gaggacaaatctatttttattttcttgttgaccactaaagttggaggactgggagtcaat
ctgaccggggccaacagagtcatcatttatgatccagattggaaccctagtacagacaca
caggcacgggaaagagcatggaggatcgggcaaaagcagcaagtaacaatctataggctg
ctgactgcaggaaccatagaagagaaaatctaccaccggcaaatcttcaagcagtttctt
acaaatcgtgttctgaaggaccccaaacagagacggttcttcaagtctaacgacgtttac
gagctctttactctggctgacccaggtggaggtcaaggaacagaaactagtgccctattt
gcaggtacaggatctgatgttaaagtacccaagaaatcggagagaccaaggccatcatac
actgtaaacctcaaaggcagccacgtgcagaaaccctcttcaccaagtcgggttgaaact
ggtgcagacagaagacactcttcctcagaagacataaggacactaggagattgcagcact
tcttcatccaatacaaatactcaggttaaatcaaatgtattgatggaccgtgaaagcacc
aaccaagatgatatgattgttgtgccaaatatttcagcaaatacactacctccaggacaa
aataacaaagactcagatacagccatgccagttgtcaaaaacgtgcagtcacctggctat
caccaccacagagacaaagaccctaccctcactagcccacagaaacacagggagaagagg
aagcactgtgactctgctgacatggagaaacacaaacataaaagatgcaaacactcccga
ggcgctcgattggaaggccaccgcatctcttatttggtaaagaaaagaactggcaggaag
actgagagtgaagaaactgcagcagaggatcagaaaaaatcagacgactatgtattggca
aagctcttcaaaaaatctggtatccacagtgtgatgcaacatgataccatcatggagtcc
tccaaccctgactatgttcttgtggaagcagaggccaacagggtggctagggatgccctt
aaagctcttaagatttctcggcagcagtgcagactgccctataatagtacagttcctcca
cctgcaaggaaacgatttggacaaaagaagaattccatcttggttcaacctgctggtcag
tctgcccccactccgatcaaatgcaaggatattgcaattgtaaagaagtctgtgtcaaag
aaacctggagctggagctcatttcagtggggaagtgccagacactgaatctaactctgcc
tcactgtcatcctcgtctctgctggccaaaatgagagcccgtaatcacctcagcaagccc
tctacccagagagaagatgaggcggaggaggaggatggatctccagctgcaagaacaacc
tctcctcctccagccactgtgcatgatgagctgttagtggatctgcgcaacttcgtagcc
ttccaggcgagtgttgatgggcaggccaccacccaggaagtcctggagtatttcaaacca
agactgacacaggaacaggcgcctgtcttcagagagctacttagaaccatctgtgatttt
cataggacctctggtcaagagggcacctggagactgaaacagtcctatcgttga
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integrated database retrieval system
