Cololabis saira (Pacific saury): 133463466
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Entry
133463466 CDS
T09849
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csai03016
]
133463466 (tarbp1)
03036 Chromosome and associated proteins [BR:
csai03036
]
133463466 (tarbp1)
Enzymes [BR:
csai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
133463466 (tarbp1)
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
133463466 (tarbp1)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133463466 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
133463466
NCBI-ProteinID:
XP_061601001
LinkDB
All DBs
Position
17:6111737..6129716
Genome browser
AA seq
1624 aa
AA seq
DB search
MHSVLINAVLKSSPDHDLLLESLLWPSESRPEPQRVDALTALIEGLGPSLSHPDSSPDAL
AKRSRIHDKIDSVIWTKCLPLLCRLSAESGGDAGCRESISAVCRLLSACVALRGAAAGRR
AALAVLPSLQPCEDHGAAAGTLSVEVAIECMACLIPFISTDDQLTDSTLSSALFSIRSLP
DQLVSKITVRILSTLLRCCGGARTRILEAVLEDLIRWHKQDGSPGVTERALLCLAALSDH
LLSPHTHPAPCTRQPDPRLRLQFWRIVQDGLVHGDSVSRKRALYLLKRCAALSAQEGVDF
PPSASDQDETLFKWAPNKTRVLKEFWEDYALVMETLEENQVHVVRPVLNRIDTLIQTTVD
DSQGLSLFHPSWLLCVYHRMFHSENKSLTREGVCHLLELQVLQHPAFALAFSQFIVGPFM
GVLSESSLFCRSAGQSIGDCPELAVKLQVFMASFFTSLPSEDRGGVLLQLIQRLGARHWS
AVPILFISQALSKLPTGQLLGISGLTALREVLLCTMITHQVLLRGAAQCFLLNSALCRTA
VSEVTLDDIFSFLMHFRADESLCRGTELWNQLCVWLLEHEGSFKSRITDGDCADLLTEKE
TVKAHVQEEMLAYLRVPASTGQNERLPDPREADKLARAILLCVDMEKNRPGAEINSTLDS
LLCPLLDTLSRVSTNIYLPLRKSDKSLQLVLSLLQLGAMPHCQRVGVEPGDDVTVAMQKL
LLRLIDPIQEFLLRRLCGELQELYDVERAELYLCVLRQLAVMCRSSLQHCNKVQQNVLPK
LIKYALSVLQEPAQQIPSVANQVMKVVAMASLAAVCGIMEQEDTGMQSQTFSALKSLNDY
FYGPVASSQHQDSLGNVNKHLIKPKLTDCSSDLEAQGLVLQDWGLVAANFMRDQWICLNF
LIKAVSIPESAGHSEASGTLKAALSCSVEALALLPSDLVLPVLAFMESVLPQLVQDEEAL
CVQAVNLSWELVKGLSTNPRDFWPALKGFVAMTFQHKLLRLTDAEAPTLTATLEEIAAEF
LELSQSKSGVFGVLVQHCCQMWTPQHPDRDEQADNVFSSVFNHVNIVTEACVYGPVFRRD
QRLVQDVHIYVEKLGDKCAANVAVTSDNRDDQLPRLCVLTFLNHLDSCNLQHERLVEQLI
MELLKKDSDISKSKTRYYSNSLQHRVKNRAWQTVLLLLPKLREEFVATLLNHVFQAGFCS
NHASVKYLIEWMMILILVRYPQHINSFWTCFNTVQEKTKTSVCTFLSVLVHFSVIVPHLK
DEVLQLRKALDVILQSCFNHNFSVRLYALLALKRVWSLAERVAEEEAGALSGLSSVVQAC
LDQAEAMQSTGNANKNWIRIQEHFFFSAFHPIRDYSIETIFYTFPSLSELAADEWIPPWK
FEKLSGFSESPSFPLRNPSPDLGQLQPGDWIQQDIGEQDKEERWADVQKKIIPWRLGIQE
VEPELQLVPAQRAARLGKQHGALLVVASLIDKPTNLGGLCRTCEIFGASALVLDNLRHVT
DKHFQSLSVSSELWLPLVEVKPVELPDFLQLKKDEGYCIVGVEQTANSQSLTDYQFPEKT
LLLLGNEREGIPASLLQLLDVCVEIPQQGVIRSLNVHVSAALLIWEYTRQHLGCGSSEVD
SKHS
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgcattccgttttaatcaacgcagtcctgaaaagctcccccgaccatgacctcctgctc
gaatccctcctctggccgagcgagtctcgtccagagccgcagcgggtggacgcgctgacg
gctctcatagagggactcggaccctcgctgtcccacccggactcttctcctgacgcgctc
gcgaaaaggagtcgtattcacgacaaaatcgactcggtcatttggactaaatgtcttcct
ttgctgtgcagattatcagcagaatcagggggggatgccggctgcagggagagcatctcc
gccgtgtgcagactgctgagcgcctgcgtggcgctgcgcggagcagctgcaggcaggaga
gcagctctggccgtgctgccctccctgcagccctgcgaggaccacggagcagcagcaggg
acactctctgtagaagttgcaatcgaatgcatggcgtgtcttataccgtttatttccact
gatgatcagctcacagacagcaccttgtcgtccgccttgttctcgatcagatccctcccc
gaccagctggtctccaagatcacggtcaggatcctctccacgctgctgaggtgctgcggt
ggtgcgaggacacggatcctggaggccgtcctggaggatctgatccgctggcacaaacag
gacggcagcccgggggtgacggagcgggcgctgctgtgtctggcagcgctgtccgaccac
ctgctgagccctcacacacacccggccccctgcacccgtcagcctgaccctcgtctgcgc
ctgcagttctggaggatcgtgcaggatggactggtccacggggacagcgtgtcgcgcaag
agggccctgtacctgctgaagaggtgtgcagcgctgtctgcacaggagggggtggacttt
cctccttctgcttcagatcaagatgaaaccttgttcaagtgggcccccaacaagaccaga
gtgcttaaagagttttgggaagattatgctttggtgatggagactctggaggaaaaccag
gttcatgtggtccggccagtcctgaacagaatagacacattgatccaaacgacggtggat
gacagccaaggtttgagtctcttccatccgtcctggttgctgtgtgtgtaccatcgcatg
ttccacagtgagaataaatccctcacaagagagggagtgtgccatctgctggagctgcag
gtcctccagcacccagcctttgcgttggccttctctcagtttatcgttggcccctttatg
ggtgttctctctgaatcatcactcttctgcaggtcagctgggcagagtataggagactgt
cctgagctagcagttaaactgcaagtcttcatggcgtccttcttcaccagcctgccatca
gaggatcgaggtggtgtgttgcttcagctgattcagcgtctgggggcgcggcactggtcc
gcagtaccaatcctcttcatcagtcaggccttgtccaaactccccaccggtcagctgctt
gggatcagcgggctcactgctttaagggaggtgctgctctgcacaatgatcacccaccag
gtgctgctgagaggagctgcccagtgtttcctgctgaacagcgccctctgtcgcacagcc
gtgagtgaagtaacccttgatgatatttttagtttcctgatgcatttccgtgctgatgag
tcactgtgtcggggcacagagctctggaatcagttgtgtgtctggttactggagcacgaa
ggcagtttcaagtccaggattacagatggagattgtgctgatctgttgacagaaaaggaa
acggtaaaagctcatgttcaagaggagatgctggcttatctcagggtgccagctagcaca
ggtcagaatgaaaggctccccgacccgagagaggcagacaagctggccagagccattctg
ctgtgcgtggacatggagaagaatcggccgggagcagagatcaacagcactctggattca
ttgctgtgtccgctgctagacaccctgagtagagtcagcaccaatatatatctgcctctg
cgaaaaagtgataagagcctgcagctggtgctcagtctgttgcagcttggagcaatgcca
cactgtcagcgtgtaggagtggagccaggggacgatgtgacggtcgccatgcagaagctg
cttctcagactcatcgatccaatccaggagtttctcttaaggcgactgtgtggggaattg
caggagctgtatgacgtggagcgagcagagctgtatctgtgtgtcctgaggcagctggct
gtgatgtgtcgttcctcattgcagcactgcaataaagttcagcagaatgtgctccctaaa
ctcatcaagtacgctctctcagtgctgcaagaaccagcccaacagatcccttcagtagcg
aaccaggtgatgaaggtggttgctatggcgtccctggctgctgtatgtggaataatggag
caagaagatactgggatgcaatcacaaaccttttctgctctcaagtcactgaatgattac
ttttacggtccagtggcttcttcacaacaccaggattctctaggaaacgtcaataaacat
ctgataaaaccaaagcttacagactgttcaagtgatcttgaagcgcaaggtctcgtcctg
caggactggggactcgtggctgcaaactttatgcgggatcagtggatctgtttgaacttc
ctcattaaagctgtcagtattcctgagtctgctggacattcagaagcgtctgggactctc
aaggctgctctgtcttgcagtgttgaggccctggctctgctgcccagtgacctggtgctg
cctgtgctcgcatttatggagtcagtgctaccccaactggtgcaggatgaagaggccctc
tgtgtgcaggctgtgaatctgagctgggagctggtaaaggggctcagcaccaatccccgt
gacttttggccggccctgaaaggcttcgtcgccatgactttccagcataaactgctcagg
ttgacggacgccgaggctccgaccctcacggctaccctggaagagatagctgcagagttt
ttggagctgtctcagtcgaagagcggagtgtttggcgtgctggttcagcactgctgtcag
atgtggacaccccaacatccagacagggacgagcaggccgacaacgtcttttctagtgtt
ttcaaccacgtgaacattgtcacggaagcttgcgtctatgggcccgtgttcaggagagat
caaagacttgtgcaagatgtccacatatatgtggagaaacttggtgacaagtgtgccgct
aatgttgccgtaacaagtgataacagggacgatcagttgccacgcctgtgtgtgttaacg
ttcctcaaccacctggattcctgtaacctgcagcatgaaagactcgtagagcagctcatc
atggagttgctgaaaaaggatagtgacatatcaaagtcaaaaacacgttactacagtaac
tccctgcaacaccgggtgaaaaacagagcctggcaaacagtgctgctgttgctgcccaaa
ctcagagaggagtttgttgccactctgttgaaccatgtgtttcaagctggattctgcagt
aaccatgcctcggtgaagtacctgatcgagtggatgatgattctgatcctcgtccgttac
ccacaacacatcaacagcttttggacttgctttaacacggttcaggagaagacgaagaca
agcgtctgcaccttcctgtcagtcctggtacatttcagtgtcattgttccacatcttaaa
gatgaggtactgcagctgcgtaaagcgcttgacgtcatccttcagtcgtgtttcaatcac
aacttcagcgtgcgcctgtacgccttactggcgctgaagagggtgtggagtcttgcagaa
agggtggccgaggaagaagccggcgctttgagcggcctgtcctcggtagtccaggcctgt
ctggaccaggccgaggccatgcagagcaccggaaatgccaacaagaactggattaggatt
caggagcacttcttcttcagtgcctttcatcccatcagggattacagtattgagactata
ttctacactttccccagtctgtcggagttagctgccgatgagtggattccgccgtggaag
tttgagaagctgtcagggttttctgaaagtccatcgtttcctttgagaaacccttctccc
gacttgggccaactgcagcccggagactggattcagcaagacatcggtgaacaagataaa
gaggagcgatgggccgatgtgcagaaaaagatcatcccctggaggttggggatccaggag
gtggagcctgaacttcagctggttcctgcacaaagggccgctcgactgggcaagcagcac
ggcgcccttctggtcgtggcctcgcttattgacaagcccaccaatttgggaggtctttgc
aggacctgtgagatatttggtgccagcgctctcgtcctggacaaccttcgccacgtcact
gacaaacacttccagtcactgagcgtctcatcggagctgtggctgcctttggtggaggtg
aagcctgtggagttgcccgacttcctgcagctgaagaaggatgaaggctactgtatcgtt
ggagtggagcagactgccaacagtcaaagcctgacggactaccagttcccagagaagacc
ctgctgcttttaggcaatgaacgggaaggcatccctgccagtttactgcagctgttggac
gtgtgcgtggaaatcccacaacaaggagtcatccgatctctcaatgtacatgtgagcgcc
gccctgttgatttgggaatatacacgacagcatctcggctgcggctcatctgaagtcgac
tccaaacacagctga
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integrated database retrieval system
