Cololabis saira (Pacific saury): 133463490
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Entry
133463490 CDS
T09849
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133463490 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133463490 (polr1b)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133463490 (polr1b)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
133463490 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Lin-28A-like_zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
133463490
NCBI-ProteinID:
XP_061601035
LinkDB
All DBs
Position
17:13999026..14014247
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSNKWRNLPEGPSLKNLTDGNFGKLKDTQHAAVQNLTKAHVESFDQAVTEGLAEVVQA
IPPLEFMSNNDKIMLNFVEATICPPAVAKGNICTETKVFPAECRGRRCTYRGRVMMDVCW
SVNDVPRGVIKQSMGFMPIMVKSKLCNLHDMSPKELVQHHEEAEEMGGYFIVNGIEKIIR
MLIMPRRNYPIAMSRPKWKTRGQGYTQYGISMRCVREEHSAVNMNLHYLENGMVMLNFIY
HKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKTCVSEMLRVVMEEGCTTRGKV
LNFLGERFRVKLNQPEWHTNQECARFLLNECICIHLKSDTEKFYMLCLMTQKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKERLTAWLTSVKIAFTKRGAKLSGGWSDENVMKLL
SMGTDLTKSFEYLLATGNLVSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRKLLPESWGFMCPVHTPDGEPCGLMNHMTASCEIVAQVAPTNSLPALLCSLGVT
PVDGSPGRAFSDCYSVVLDGAVVGWVETDLAPMVVDSLRRFKVLREKTVPSWMEIVLVPK
TGKASLYPGLYLFTTPCRMMRPVQNLSLGQQELIGTFEQLYMNVAVFEKEVEAGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYDLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELID
LAEKMKGVNCVVFGVKPGDPKVKDRLDADGLPHIGATLQYGDPFYSYINLNTGQTFVNYY
KSQEACVVDNIKVCSNDAGSGPFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEH
FGEMLRAGGYNYYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSAFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPSWSATRHRNTVCTLCGKSDAIASVSVPYVFRYFVAELAAMNIRVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcaaataagtggagaaatctgcccgaaggtccgagtttaaagaacctgacc
gacggaaacttcgggaaactgaaggacacgcagcatgctgctgttcaaaacctgactaaa
gctcatgtcgagtcttttgaccaggcggtgacggagggactggccgaggtggtgcaggct
atcccccctctcgagttcatgtccaacaatgacaagatcatgttgaacttcgttgaagcc
accatctgcccccctgcggtcgctaagggcaacatttgcaccgagacgaaggtgtttcct
gccgagtgtcgaggcaggagatgcacctacagaggaagagtcatgatggacgtctgctgg
tccgtcaacgatgttcccagaggcgtcatcaagcagtccatgggcttcatgccgatcatg
gtgaagtccaagctgtgtaacctgcacgacatgtctcccaaagagctcgtacaacatcac
gaagaagcagaggaaatggggggttatttcatcgtgaacggcattgagaagattatccgt
atgctcataatgccaaggaggaactatcccattgcaatgtccagacccaagtggaagacc
aggggtcagggatacacccagtacggtatttctatgcgttgtgtgcgagaggagcactcg
gcagtcaacatgaacctccattatctggagaacgggatggtgatgctgaacttcatctac
cacaaagagctcttcttcctgcccttaggttttgctctgaaggctctcgtggacttcaca
gacttccagatctaccaggagctgatcaaaggccgcgaggacaactccttttacaagacg
tgcgtgtcggagatgctgcgtgtcgtcatggaggaaggctgcaccacccgcggaaaagtg
ctcaacttcctgggagagcgattcagggtgaagctgaaccagccggagtggcacaccaac
caggagtgtgccaggttcctgttgaacgagtgcatctgcattcacctgaagtcggacaca
gagaagttctacatgctgtgtctgatgacccagaagcttttcacgttcgccaagcaggag
tgcatggaggagaacccggacagcatcatgtgtcaggaggttctcacccccggccagctc
tacctcatgttcctcaaggagagattgacggcctggttaacttctgtgaagattgctttc
accaaaagaggagccaaactgtctggaggatggagcgatgagaacgtgatgaagctgctg
tccatgggcaccgacttgaccaagtcgtttgaatatctcctggcgaccgggaacctcgtc
tccaagacgggtctcggcatgctgcagaacacgggcctgtgcgtcgtggccgacaagctc
aacttcatccggtacctgtcccacttccgctgcgtgcacagaggcgcggccttcgccaag
atgaggaccaccacggtccggaagctgctgccggagtcctggggcttcatgtgccccgtg
cacaccccggacggagagccctgcggcctcatgaaccacatgaccgccagctgcgagatc
gtggctcaggtggcgcccaccaactcgctgccggctcttctctgttccctcggcgtgacc
ccggtggacggatccccgggccgggccttctcagactgttactccgtggttctggacgga
gctgtggtcggctgggtggagacagacttggcaccaatggttgtcgactcactgcgcaga
ttcaaggtgctgagagagaagacggttccttcctggatggagatcgtcctggttcccaag
acgggcaaggccagtctgtatcccggcctgtacctgttcacgacgccctgccgcatgatg
cgtcccgtccagaacctgagtctcggccagcaggagctgattggcacgtttgagcagctc
tacatgaacgtggcggtgtttgagaaggaggttgaagccggcgtcaccacgcaccaggag
ctgttccctcacagcatgctcagcgtggtggccaacttcatcccttactccgaccacaac
cagagtcccagaaacatgtaccagtgtcagatgggtaagcagacgatgggtttccctctg
cactccttcatggaccgctccgataacaagctgtaccggctccagacgccccagagcccc
ctggtccggccgtacatgtacgaccactacgacctggacaactacccgagcggcaccaac
gccatcgtggccgtcatctcctacaccggctacgacatggaggacgccatgattgtgaac
aagtcgtcgtgggagaggggcttcgcccacgggagcatctacaagacggagttaatcgac
ctggcggagaagatgaagggagtgaactgcgtggtgttcggggtgaagccgggagacccg
aaggtgaaggacagactggacgctgacggtctgcctcacatcggggcgacgcttcagtac
ggagacccgttctacagctacatcaacctgaacacgggacaaaccttcgtcaactactac
aagagccaggaggcctgcgtcgtcgacaacataaaggtctgcagcaacgacgccggctcg
ggcccgttcaagcgcgtctgcatcacggtgcgagtgccgagaaacccaaccatcggagac
aagttcgccagccgccacggccagaagggaatcctgagccgcctctggccggcggaggac
atgcccttcacggagagcggcatggcgccggacatcctgttcaacccgcacggcttcccc
tcccgcatgaccatcggcatgctcatcgagagcatggcgggcaagtcgggcgccctgcac
ggcctgagccacgacgccacgcccttcaccttctccgaggagaactcggcgctggagcac
ttcggcgagatgctgcgcgccggcggctacaactactacggcacggagcggctgtacagc
ggcgtgagcggcctggagctggaggccgacatcttcatcggcgtcgtctactaccagcgg
ctgcggcacatggtctccgacaagttccaggtgaggacgacgggagcgcgggacaaggtg
accaaccagccggtgggagggaggaacatccagggaggaatccgcttcggggagatggag
cgcgacgccctgctggcccacggctcggccttcctgctgcacgaccggctcttcaactgc
tccgaccgctccgtggcgcaggtctgcgtggactgcgggagcctgctctcgccgctgctg
gagaagccgccgccgtcctggtcggccacgcgccaccgcaacaccgtctgcacgctgtgc
ggcaaaagcgacgctatcgcgtccgtgtccgttccctacgtcttccgctacttcgtggcc
gagctggcggcgatgaacatcagagtcaaactggatgttaagtga
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integrated database retrieval system
