Cololabis saira (Pacific saury): 133463516
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Entry
133463516 CDS
T09849
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133463516 (hps1)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
133463516 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
133463516
NCBI-ProteinID:
XP_061601068
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Position
17:complement(19134519..19142710)
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AA seq
680 aa
AA seq
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MKCLLIASHSAEVLFHWTDQEFQHNVQEQYGASQEEGERLPAFEDIISTLFAPIIISCST
MVYGQGDGYTSFTTENNHIYVLHQFDECLYIAVNGDGEEKEDDLRRKICVMKKMIDVMFG
MVTLSGDLLRKELRPQDTKQRAVLWKHLQGLLETYSHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSVDRAGEEVLHAFILVHTKLLAFYSSRNASTLTTSDLLALIIMA
QNMYPSNADLDEPSPEDIESTSGSGPESFYTPEPSPSSRNSSGSERPVRGNTPVFEFVDP
DIQMAEDSLDTLEISPPDPSTPSRVFLEVSQRDGLYPMMPHSMYCLPLWPGITLVLLTKV
PTSAVAMSVYKFLEAFAKLEKRLSEGQAGSAAARGQLNIHDIRNKLDKFIKALGPSELQS
AQLQNVWTEFKNRAFARGGPGLSNDLIPVCKAMKTQLCGIYRQCFLTDPGPSDIPRRLSP
ALQERAQAMVQEKLVDWKDFLLVKSKRNITMVSYLEDFPGLVHFICVDRSSGQMIAPSLI
ITERTTSELGKGPVAHYIKNKVWGLVRTTRHYLQRGYSTVTLRDGDFYFCYFLWFENETG
YKLEAGDIPILSDDSAPIGMLAWDYYRKLLRYYSKSHQGEAVKCYELLTVHLGVIPTEII
LQHCRQLASKLWEPSRNPLL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttgctgatagccagccacagcgctgaggtcctcttccactggactgaccag
gagttccagcacaatgtccaggaacagtatggagcatctcaggaagagggcgagaggctt
ccagccttcgaggacatcatcagcactttgtttgcgcccatcattatttcctgctccacc
atggtgtacggacaaggggacggctacacctccttcaccacagaaaacaaccacatctat
gttttacaccagtttgatgagtgcctgtacatagctgtgaatggagatggggaggagaag
gaggacgatctgaggaggaagatctgcgtgatgaagaaaatgattgacgtaatgtttggg
atggtcactctcagtggggatctcctgagaaaagaacttcgtcctcaggacacaaagcaa
agagcggtgctgtggaagcatctccagggcctgctggagacttacagccacctccgggag
aatgaccagagcttcttagtggaggcagtggagaggttaatccaccccactctgtgtgag
cagtgcatcgagttcttggagcgtcgtttggttcagcagctcaacagcagtgttgacaga
gcaggagaggaggtgctgcatgccttcatcctggttcacaccaaactcctcgctttctac
tccagccgcaatgcgagcacgctcaccacttcagacctcctggcactcatcatcatggcc
cagaacatgtatccaagtaacgcagacctggatgagccgagtcccgaggatatcgagagc
acatctggttctggtcctgagagtttttacaccccagaaccctccccatctagcagaaac
tccagcggttcagagaggccagtcagaggaaacacccccgtgtttgagtttgtggatcca
gacatccagatggcagaagacagcttggacaccctggaaattagtccgcctgacccgtca
acaccgagcagagtcttccttgaggtctcacagcgggatgggctttatcccatgatgccc
cactccatgtactgtcttccactgtggcctgggatcacattagtgttactaaccaaggtt
cccaccagtgcagtggccatgtcggtctacaaatttctggaggccttcgccaagttggag
aagcgcttaagtgaaggtcaagcaggttctgcagcagccagaggacagctgaatatacat
gacatccgaaacaagctggacaagttcattaaagccttgggacctagtgaattacagtct
gcacagcttcaaaatgtgtggacagagttcaagaacagagccttcgccagaggaggaccg
gggctgagcaacgatctcatcccagtgtgtaaggctatgaagacccagctgtgtggcatt
taccggcagtgttttcttactgatcctggaccgtctgacattcctcgacgcctctcccct
gctctgcaggaacgagcccaggctatggtgcaagagaagctggtggactggaaggacttt
ctgttggtgaaaagcaagagaaacatcaccatggtgtcttacctggaggattttccagga
ctcgtccatttcatctgtgtggaccgatcgagcggccagatgatcgctccgtctctcatc
atcaccgagcgcaccacgtctgagcttgggaaggggccggtggctcattatatcaaaaac
aaggtgtggggcctggtcaggacgacacggcactatctccagaggggttactccactgtc
acacttcgcgatggagatttctatttctgctacttcctgtggtttgaaaacgaaaccggg
tataaactagaggctggggacatacccatcctctcggatgactctgcgcccatcgggatg
ctcgcgtgggattactacaggaagctgctccggtactacagtaagagccaccagggcgag
gcggtcaagtgctacgagctcctgacggtgcacctgggggtcatccccactgagatcatt
ctccagcactgcagacagctggcaagcaagctgtgggagccctctcgtaatccgctgctg
tag
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