Cololabis saira (Pacific saury): 133463728
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Entry
133463728 CDS
T09849
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
133463728 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133463728 (kcnma1a)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
133463728 (kcnma1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
133463728
NCBI-ProteinID:
XP_061601411
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Position
17:21341682..21499914
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AA seq
1351 aa
AA seq
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MLAEADGTVPHGSDSSMRTSSINTKTNPDSSILISKMENVVIPFSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKTKEAQKVNNPANNQAADRPPKGADE
KEEVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEYKSEQRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDP
KRIKKCACKRLLDEVKPSLQKRSVKTTGCISTSISSNAFLIPKAPHPRQEPLVRRGTANT
TIVNIHRGSLLPAGPGPRAEPSHMHLGISGPGGVVPRSLAESRLNRAHSLPVKYRYQPSN
AMLLSHSRHFEDEHPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDMN
VKRYDSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLR
ASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVI
LSANQNNIEDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVH
GFVRQASVTTGSNIPIITELAKPGKLLPLVSHSQEKKSGTNIQMITELVNDSNVQFLDQD
DDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLA
EENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGI
YRLRDAHLGTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSH
SSSKKSSSVHSVPASNRQNRSSKTREARDKQNATRMNRMGQEKKWFTDEPENAYPRNIQI
KPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgctagccgaggcggatggcacggttccccatggaagcgacagctctatgaggacaagc
agcatcaataccaagacaaacccggactcttcgatcctaatatccaagatggaaaacgtc
gtcatccccttctcgtccgaggtgccatgcgacaataatgggcagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgtttttcgggggtctcttcatcatcctgttgtggagg
accctcaaatatctgtggactgtttgctgccactgcaacattaaaaccaaggaagctcag
aaggtgaacaatccggccaacaatcaggcagcagacaggccaccaaagggagctgatgag
aaggaagaagttccagccagtgaggtgggatggatgacttcagtcaaagattgggccggt
gtcatgatctccgctcagacgctcacgggaagagttctggtggtgctagtgtttgcactc
agcatcggggcccttggaatatacttcatagactcctctgatcctatagagtcctgccag
aacttctacaaagatttcacattacagatcgatatggccttcaacgtcttcttccttctt
tattttggcctgcggtttatagcagccaatgacaagctgtggttctggctggaggtcaac
tctgtggtcgacttcttcaccgtccctcctgtgttcgtttccgtctacttgaacagaagc
tggcttggtttaagatttctaagagcactgagactgatccaattctcagaaatcctacag
ttcttaaatatcttaaaaacaagcaattccatcaagctagtgaatttgtgctccatcttc
attagcacttggctcacagctgccggtttcatacatttggtggagaactcaggagatcca
tgggaaaacttccagaattcccagtcactatcctattgggaatgtgtgtacctgctgatg
gtgacgatgtccacagtgggctacggggatgtctatgcaaaaaccacgttgggacgactc
tttatggtcttcttcatcctcggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgtcattttacccaagtagagttctaccag
ggttctgttctcaaccctcatgatctggcgcgagtgaagatcgagtcagcggatgcctgc
ttaattctagccaacaaatattgtccagatcctgatgctgaagatgcctccaatatcatg
agggttatttcaatcaagaactaccatcccaagatcagaatcatcacgcagatgctacaa
tatcacaataaggcccatctgctgaacattccgagctggaactggaaggaaggtgatgat
gctatctgcctggcagagctgaaggcaggtttcattgcccaaagctgtctggcgcagggc
ctgtcgaccatgctagccaaccttttctccatgaggtccttcattgagattgaggaggac
acatggcaaaagtattaccttgaaggagtggctaatgagatgtacacagagtatttgtcc
agtgcctttgtaggcctctcctttcccactgtctgcgagctgtgctatgtgaagctgaag
ctgttgcttattgcaattgaatacaagtctgagcagagagagagcagcatcctcataaat
ccgggcaaccacgtcaagatgcaggagggaacactgggattctttatcgctagtgatgcc
aaagaagttaagagagcatttttctactgcaaagcttgtcatgatgacatcacggacccc
aaacggattaagaaatgcgcctgcaaacgactattggatgaagttaaaccgtccttacaa
aagcgatcagttaaaaccaccggctgcatctccacctccatctcctcaaatgcattcctc
attcccaaagccccgcatcccagacaggaacccctggtcaggcggggcacagccaacacc
accattgttaatatccatagaggaagcctcctccctgcggggccggggcccagagctgag
ccttcacacatgcacctcggcatctcaggtccaggaggtgtggtgcccagatccctggca
gagagtcgactgaaccgggcccacagtctgccggtgaaataccgctaccaacccagtaat
gccatgctgctcagtcacagtaggcactttgaagatgagcatccatcaactctctcgccc
aaaaaaaagcagcgcaacggagggatgcgaaactcgcctaactgttcacccaaaatgatg
agtcggcacgacccccttctgatccctgggaacgaacagatcgagaacatggacatgaac
gtgaagaggtatgactcgacagggatgttccactggtgcccttccaaagacatcgagaaa
gtcatcctgacccgcagtgaagcctccatgacggttctgagcggtcatgtagtggtctgt
atatttggagatgtcacgtccgcattagtggggctgcgaaacttggtgatgcctttaaga
gcaagcaacttccattaccatgaactaaagcctatagtgttcgtgggctcgctggattac
ctgcggcgagagtgggaaacgcttcacaactttcccaaagtctcaatcttacctggtaca
ccattaagccgggcagatttaagggctgtcaacatcaacctctgcgacatgtgcgtaata
ctgtcagccaatcagaacaatatcgaagatacctcactgcaggataaagaatgcatcttg
gcatcgctcaacatcaaatctatgcagtttgatgacagcattggggtcttacaggctaat
tcccaaggtttcacacctcctggaatggacaggtcatctccagacagcagtccagtacat
ggctttgtgcgtcaggcttctgtgaccaccggctccaacatccccatcatcacagagcta
gctaaacctggcaaactactgccgttggtttcacacagtcaggaaaaaaaaagtggaacc
aacatacaaatgataacagagctggtgaacgactcaaacgttcagttcctggaccaagat
gacgacgatgacccagacacggagctgtatctcactcagcccttcgcctgtggcacagcc
tttgccgtcagtgtactcgactccctgatgagcgcgacatacttcaatgacaacatcctc
actctgatccgaacactagtcacggggggagccacaccagagctggagggcctgttggct
gaggagaacgctctcagaggaggctacagcacaccacagacactggccaacagagacagg
tgtcgtgttgcccaactagccctctacgacgggccatttgctgacttgggggacggcggc
tgctacggggatttattctgcaaagctctgaagacatacaacatgttgtgtttcgggatc
tacagattaagggacgcgcatctcggtacaccaagccaatgcacaaaacgatatgtgatc
acaaaccccccgtacgagtttgagctggtgcccacagacctgatcttctgcctcatgcag
ttcgaccataacgctggtcagtcgaggacgagtttatcccattcttcccactcctcccat
tcctccagcaaaaagagctcctccgtgcactccgtccccgcctccaaccggcagaaccgc
agcagtaagacgagggaggcccgtgacaaacagaatgcaacaaggatgaatagaatgggc
caagaaaagaaatggtttacagatgaaccagaaaatgcctacccaaggaacattcagatc
aagcccatgagcactcacatggccaaccaagtcaaccaatacaagtccactagtagcctg
attccaccaatcagagaagttgaagatgaatgctga
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