Cololabis saira (Pacific saury): 133463753
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Entry
133463753 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133463753
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133463753
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
LRR_6
LRR_4
SPRY
AFG1_ATPase
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
133463753
NCBI-ProteinID:
XP_061601448
LinkDB
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Position
17:complement(2661992..2726344)
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AA seq
1194 aa
AA seq
DB search
MDQCEDREEGVLPTSTSPRGKPESRREEERRQHGPGPGPGPSCVSLKSDASKDLFINYKD
SPGCPSERFHQKTDSHGPGPGPGPGPGPEPGPEPGPSCVSLKSDASKDLIICFKDAPGFP
SERVDQKISESPSGPSVQQHQTQLDSIFQLLENDIVIFVKVELKKIQKVLSTDYPESSES
LEEDEDEEQKRIREAFMKITVKFLRRRKQEKLAELLQNNTVAAICQSKLKGQLQKKHQHV
SEGITKAGKTTLLEQIYTELYITEGGTGEVNDEHEVRQIEAASRKPDRAETAIRQEDIFK
PPPGRGGPIRTVITKGVAGIGKTVLTQKFSLDWAEGRTNQDIQFLLPFTFRELNVLREEK
FSLMELVHGFFSETKGICSFEELQVVFIFDGLDECRLPLDFHNPTIVSDPRRSTSVDVLL
TNLLRGNLLPSARLWITTRPAAANQIPPYCVDMVTEVRGFTDPQKEEYFRKRFRDEEQTS
RIISHIKTSRSLHIMCHIPVFCWITATVLENVLENVLENVLETREGEELPKTLTEMYIHF
LVVQAKLKKVKYDGGAEMDPHWSPESRKMVESLGKLAFEQLQKGNLIFYEPDLRECGINV
REASVYSGVFTQIFREERSLYQHQVFCFIHLSVQEFLAALHVHQTFMKSGVNLLEEQRNT
YSWFKTRAENQLYQRAVDKTLQSQNGHLDLFLRFLLGLSVETNQNLVLGLMTSNQRSSQN
NQETIKYIKEKISEDLSAERSINLFHCLNELNDRSLVEDVQRSLRSGRLSTGKLSPAQWS
ALVFILLSSGDLEVFDLKKFSASEEALRRLLPVVQASKKVLLSGCNLSKDICELLSSVLS
SQSSSLTELDLSNNDLQDSGLEQLCPGLESPHCKLESLRLSGCNLSKDICPVLSSVLSSQ
SSSLTELDLSNNDLQDSGLEQLCPGLESPHCKLESLRLSGCLISEVGSASLVSALTSNPS
HLRELDLSYNHPGESAGKLLSRLEDPRWRLDTLRVEPAGQRWLRPGLRKYSCQLTIDTNT
VHKYIKLSDDNRKMMFVEEDQSYPDHPDRFDDQPQLLCREVLTGRCYWEVQWSGDVSVSV
SYRRICRGELSDDCLFGWNDHSWSLDCSDDGRYRVWHNNRYTSIISSSSCPDSGRVAVYV
DIPAGTMSFYDVDPDRLIHLHTFNTTFTEPLCAGFGLWFWSGSWLGHSVSLCLV
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccttcccactagtacttccccgagggga
aaacctgagagtcggagagaagaagagaggagacaacatggacctggacctggacctgga
cccagctgtgtgtccttgaagagtgatgcatcaaaggatttatttatcaattataaagat
tctcctggttgtccttcagagaggtttcatcagaaaacagactctcatggacctggacct
ggacctggacctggacctggacctgaacctggacctgaacctggtcccagctgtgtgtcc
ttgaagagtgatgcatcaaaggatttaattatatgttttaaagatgctcctggttttcct
tcagagagagtggaccagaagatctcagagtcccccagtggtccgtctgtccagcagcat
cagacccagctggactccatctttcagctgctggagaacgacatcgtcatatttgtgaag
gtcgagctgaagaagatccagaaggttctgagtacagattacccagaatcctcagagagt
ctggaggaggatgaagatgaagagcagaagagaatcagagaggcattcatgaagatcaca
gtgaagttcttgaggaggaggaagcaggagaaactggctgaactcctgcagaataatacc
gtcgctgccatttgtcaatcaaaactcaaaggtcagctgcagaagaagcaccagcatgtg
tctgaggggatcactaaagcaggaaagacaacccttctggagcagatctacacggagctc
tacatcacagagggagggaccggagaggtcaacgatgaacatgaagtcagacagattgaa
gcagcttccaggaaaccagacagagcagaaacagccatcagacaggaagacatctttaaa
cccccacctggaagaggaggaccaatcagaacggtgataacaaagggagtggctggcatt
gggaaaacagtgttaacacagaagttcagtctggactgggctgaaggcagaaccaaccag
gacatccagttcctgcttccattcaccttcagagagctaaatgtgctgagagaggagaag
ttcagcttgatggaactagttcatggattcttctctgaaaccaaaggaatctgcagcttt
gaagagttgcaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggac
ttccacaaccctacaatcgtcagtgaccccagaaggtccacttcagtcgatgtgctgctg
acaaacctcctcagggggaacctgcttccttctgctcgtctctggatcaccacacgaccc
gcagcagccaatcagatccctccttactgtgttgacatggtgacagaagtcagagggttc
actgacccacagaaggaagaatacttcaggaagaggttcagagatgaagagcagaccagc
aggatcatctcccacatcaagacatcacggagcctccacatcatgtgccacatcccagtc
ttctgctggatcactgctacggtcctggagaacgtcctggagaatgtactggagaacgtc
ttggaaaccagagagggagaggagctgcccaagactttgactgagatgtacatccacttc
ctggtggtccaggccaaactgaagaaggtcaagtatgacggaggagctgagatggatcca
cactggagtccagagagcaggaagatggtggagtctctgggaaaactggcttttgagcag
ctgcagaaaggaaacctgattttctatgaaccagacctgagagagtgtggcatcaatgtc
agagaggcttcagtgtactcaggagtgttcacccagatatttagagaggagaggagcctg
taccagcaccaggtcttctgcttcatccatctgagtgttcaggagtttctggctgctctt
catgtccatcaaaccttcatgaagtctggagtcaacctgctggaagaacaaagaaacacc
tactcgtggtttaaaacaagagcagagaatcaactctatcagagagctgtggacaagacc
ttacagagccaaaacggacacctggacttgttcctgcgcttcctcctgggtctttcagtg
gagaccaatcagaacctggtactaggtctgatgacatcaaaccaaagaagttcacagaac
aatcaggaaactatcaaatacatcaaggagaagatcagtgaggacctgtctgcagagaga
agcatcaacctgttccactgtctgaatgaactgaacgatcggtctctggtggaggatgtc
caacggtccctgaggtctggacgtctctccacaggtaaactgtctcctgctcagtggtcg
gctctggtcttcattttactgtcatcaggagatctggaggtgtttgacctgaagaagttc
tcagcttcagaggaggctctacggaggctgctgccggtggtccaagcctccaagaaagtt
ctactgagtggctgtaacctctcaaaggacatctgtgaacttctgtcctcagttctcagc
tctcagtcctccagtctgacagaactggacttgagcaacaacgacctgcaggattctgga
ctggagcagttgtgtcctggactggagagtccacactgtaaactggagtctctcagactg
agtggctgtaacctctcaaaggacatctgtccagttctgtcctcagttctcagctcccag
tcctccagtctgacagaactggacctgagcaacaacgacctgcaggattctggactggag
cagctgtgtcctggactggagagtccacactgtaaactggagtctctcaggttgtcaggc
tgtctgatctcagaggtaggaagtgcttctctggtctcagctctgacctccaacccctcc
cacctgagagaactggacctgagctacaaccatccaggggagtcagcagggaagcttctg
tctagactggaggatccacgctggaggctggacactctcagggtggagcctgctggacaa
cgatggttgagaccaggtctgaggaagtattcctgtcaactcaccatcgacacaaacaca
gtccacaaatacatcaaactgtctgatgacaacaggaagatgatgtttgtggaggaggat
cagtcatatcctgatcatccagacaggtttgatgatcagcctcagctgctgtgtagagaa
gttctgacgggtcgctgttactgggaggtccagtggagcggagatgtttctgtatcagtg
agttacagaagaatctgcaggggagaattatctgatgactgtttgtttggatggaacgat
cattcctggagtctggactgttctgatgatggtcggtaccgtgtatggcacaataacaga
tacacatccatcatctcctcatcttcatgtccagactctggcagagtagcagtgtacgtg
gacattcctgctggaactatgtccttctatgatgtcgaccctgacagactgatccacctc
cacaccttcaacaccaccttcactgaacctctctgtgctggatttggactctggttctgg
tctgggtcctggttaggtcactcagtgtctctgtgtctggtttag
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