Cololabis saira (Pacific saury): 133463768
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Entry
133463768 CDS
T09849
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133463768 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133463768 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133463768 (nfkb2)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
133463768 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
133463768
NCBI-ProteinID:
XP_061601464
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All DBs
Position
17
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AA seq
900 aa
AA seq
DB search
MAGALRMTEAQFINYDHDLQLNLMPFDYIPPVEIKMEPYIPETAHGPYIQIIEEPKQRGF
RFRYECEGPSHGGLPGASSEKNRRTYPTVKVNNYVGQARVEVQLVTHTDPPRVHAHSLVG
RHCTESGTCVLDVGPNDLTASFSNLGILHVTKKGVVDVLTRRLREERKRQKGGHPHLADG
EEAAILKEAKDLGKSMDLNIVRLKFTAFLEDSNGSFTRALKPVVSNPIYDSKSPNASNLK
ISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAIV
FKTPPYHSAEIERAVTVFLQLRRKKAGDSSDPKQFTYTPHVQDKEEVMRKKQKPLPHYEN
WRGGGRGGGAGGFGGGGATGGPGFQFHQQMNGAGGGAGGGAFFTAGFTGFSGGGGAQMSG
GPAPQGDGQRGSSVQKLLQIAASLSSRASQSAQQTAAALLQYCSTGDARVLLAVQRHLCS
VQDNNGDTPLHLSVIHQQANVTQQLVQTLLSSRQQNVLNTPNHLAQTPLHLAVITRQPKA
AELLLRGGADPGLLDRDGRSPVHLAALAGDGAMLRLLLAHLGERHAHLVNAPDYHGLQPL
HLAVRRDGERCLRLLVEGGAKINAPEQKGGSTALHLAVRENLFKVACTLITELKADVNAA
TFGGNTPLHLAASLGSPTLCSMLVAAGADKNVENDEPLFFSSSSDEEPDEPIRDGAAGGE
PIRDAAAGGEPASQPISARKRPAAGHTPLDLATCQKVRNLLNSSRGQSSSRPSSKKIRSS
SSEDVEASRLDEDTLARLVSLLSVGDVPWMKLAEKLGMMTLTHLYRDSPAPCTHLLQHYQ
LGGGQVEGLVEALQSLGLTEGVRLLNSSILQQDKHNTDATVDSGFGSQPMEEEEPPAVNQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctgaggatgactgaagctcagttcatcaactacgaccacgatctgcag
ctcaacctgatgccgttcgactacattcccccggtggagataaagatggagccgtacata
cctgagacagctcacggaccgtatatccagatcatcgaggagcccaaacagagggggttc
cggttccggtacgagtgcgagggcccgtcccacggcgggctgcccggggcctccagcgag
aagaaccggaggacctaccccaccgtgaaggtgaacaactacgtgggtcaggcccgggtg
gaggtgcagctggtgacccacaccgaccctccccgggtccacgcccacagcctggtggga
cgccactgcaccgagagcggcacctgcgtgctggacgtgggacccaacgacctgacggcc
tcgttcagtaacctgggaatcctccacgtgaccaagaagggcgtggtggacgttctgacc
cggaggctgcgggaggagaggaagaggcagaagggaggacaccctcacctggcggacggg
gaggaggcggccatcttgaaggaggccaaggacctggggaagagcatggacctgaacatc
gtccggctcaagttcacggcctttctggaggacagtaacggcagcttcacccgcgctctg
aagccggtggtgtccaaccccatctacgacagtaagtctccaaacgcctccaacctgaag
atttcccggatggacaagacgtgcggctcggtgctcggaggagacgagatcttcctgctg
tgtgacaaagtccagaaagacgacatcgagatccgattctacgaggaagacgacgagggc
ggatgggaggcctttggggatttctcccccaccgacgttcacaagcagtacgccatcgtg
ttcaagacgcctccgtaccacagcgccgagatcgagcgagccgtcaccgtcttcctgcag
ctgaggaggaagaaggccggagacagcagcgaccccaaacagttcacctacacgccgcac
gtgcaagacaaagaggaggtgatgaggaagaagcagaagccgctgccgcactacgagaac
tggagaggaggaggacgagggggcggagccgggggcttcggagggggcggagccacggga
ggaccagggttccagttccaccagcagatgaacggggctgggggcggagccgggggcggg
gccttcttcacggccggcttcaccggcttcagcggagggggaggagcccagatgtcggga
ggccccgccccccagggtgacggacagcgcggctcctcggtgcagaagctgctgcagatc
gccgcctccctgagcagccgcgcgtcgcagagcgcccagcagacggctgcagcgctgctg
cagtactgcagcaccggggacgcccgcgtcctgctggccgtgcagagacacctgtgcagc
gtccaggacaacaacggagacacgcctctgcacctgtccgtcatccaccagcaggccaac
gtgacgcagcagctggtccagacgctgctgagcagccgacagcagaacgtgctcaacacg
cccaaccacctggcgcagacgcccctccacctggccgtcatcacccgccagcccaaggcg
gccgagctgctgctgcgcggcggcgccgacccgggtctgctggaccgggacggacgcagc
ccggtccacctggcggcgctggccggggacggggccatgctccgcctcctgctggctcac
ctgggggagagacacgcccacctggtcaacgcccccgactaccacggtctgcagccgctg
catctggccgtgcggcgggacggagagcggtgtctccgcctcctggtggagggcggggct
aagatcaacgccccggagcagaagggcggcagcacggcgctgcacctggcggtgcgggag
aacctgttcaaggtggcctgcacgctcatcaccgagctgaaggccgacgtcaacgccgcc
accttcgggggaaacacgccgctgcacctagccgctagcctcggatcgccaacgctctgc
tccatgctggtggccgcaggcgctgataagaacgtggagaacgacgagccgctcttcttc
agctcctcgtctgatgaagagccggacgagccaatcagagacggcgctgcaggaggagaa
ccaatcagagacgcagctgcaggaggagaacccgcctcccagccaatcagtgctaggaag
aggccggcagcaggacacaccccgctggacctggcaacctgtcagaaggtgaggaacctg
ctgaactccagtcggggtcagagttcaagtcgtcccagcagcaagaagatccgctccagc
agcagcgaagacgtcgaggcgtcccggctggacgaggacacgctggcccggctggtgtct
ctgctgagcgtcggggacgttccctggatgaagctggcggagaagctgggcatgatgacg
ctgacgcacctgtaccgggacagccccgccccctgcacgcacctgctgcagcactaccag
cttgggggggggcaggtggagggtctggttgaagctctccagtctctcggtctgacagaa
ggagtccgactgttgaacagcagcatcttgcagcaggacaagcacaacacagacgccacc
gtggacagcggcttcggcagccagccgatggaggaggaggagcctcctgctgtcaatcag
tga
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