Cololabis saira (Pacific saury): 133463809
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Entry
133463809 CDS
T09849
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133463809 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133463809 (nvl)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133463809 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_2
AAA_14
NPHP3_N
AAA_33
TIP49
Mg_chelatase
AAA_28
RNA_helicase
AAA_17
nSTAND3
AAA_18
Rad17
TsaE
NACHT
ABC_tran
ATPase
Viral_helicase1
Zeta_toxin
nSTAND_NTPase5
IstB_IS21
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
133463809
NCBI-ProteinID:
XP_061601516
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All DBs
Position
17:38679135..38719858
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AA seq
884 aa
AA seq
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MNNRGGGWLDGRLKQRVQQYLASSNREYVDLSEMALDLQRLYRMDYGRRNKTAFRIQVEK
AYDAVRKDSDLDELESKHLAKKARSSHSEAGDGSSSSSEGSSDDTDDHIQDNTLNSSVTS
LYRRAGAGPSSPSQSNAPPNPAGTLVSPGGWFIDKGKPPPRKNICIDLCGDEPAHAAAKV
DVAALEPEKSHKKSRKRAKSSAEPAETPTLNKKAKSKPLELQYPALRFEDVGGNEDTLTE
VCKLLMHIRHPEVYQHLGMVPPRGFLLHGPPGCGKTLLAQAVAGELQLPLLKVSAPELVS
GVSGESEQKLRELFDLAVSSSPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLN
SPAVTAQLLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAARLRILKTLCRKLKLPED
FDFQQLARLTPGYVGADLMALCREAAMSAVNRVLLDLRARLQEPVRSTDEELAAGGTAGG
AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAPAQ
AGEAQLQQGELWQLLALLKASETLSEEQLQGLSILMSDFKEALSSVQPSAKREGFATVPD
VSWDSVGALHDIREELTMAILAPVRSPEQFKALGLSAPSGVLLAGPPGCGKTLLAKAVAN
ESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEVDALCPRRSGHESGA
SVRVVNQLLTEMDGLEARRQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPGPEDRHAI
LLAITKGGSKPPLDQDVSLEQIAFDERCDCFSGADLTALVREASVNALKAYRKSQHCGHA
GSCSCISDLRVSRQNFEDGFRAIRPSVTKKDQKMYEQLKESLSR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagagggggaggctggctggacggccggttaaaacagagagtccaacagtat
ctggcctccagcaacagggaatatgtcgacctgtcagaaatggccctggaccttcagaga
ctatacagaatggactacggcagaagaaacaagacggcgttcagaatccaagtggagaaa
gcgtatgacgccgtgaggaaggactcggacctggatgagctggagagcaaacacttggcc
aagaaggcccggagcagccacagtgaagctggggacggcagcagcagcagctccgaggga
tcctccgacgacacagacgaccacatccaggacaacacgctcaacagctccgttacgtct
ctgtaccggagggccggcgcgggtcccagcagtcccagccagagcaacgccccccccaac
cctgcagggaccctggtgtcccccgggggctggttcatcgacaaagggaagccccccccc
aggaagaacatctgcatcgacctgtgcggagacgagccggctcatgcagcggctaaagtg
gacgtggcggcgctggagcccgagaagagtcacaaaaagtccagaaaaagagccaaaagt
tcagccgaacctgcggagactcccaccctgaacaagaaagctaaatctaaaccccttgag
cttcagtacccggctctgaggtttgaagacgtgggcggtaacgaagacacgttgacggag
gtgtgtaagctgctgatgcacatccgccacccggaggtgtaccagcacctggggatggtt
cccccccggggcttcctcctgcacgggcctccgggctgcgggaagacgctgctggcgcag
gccgtggccggggagctgcagctgcccctgctgaaggtgtcggccccggagctggtgtcg
ggcgtgtccggggagtcggagcagaagctcagagagctgtttgatctggccgtgagctcc
tcaccgtgcatcctgttcatagacgagatcgatgccatcactcctaaaagagaggtggcc
tccaaagacatggagcggaggattgtggcccagctgctgacctgcatggatgacctgaac
agtccggcggtgacggctcagctcctggtcatcggcgccaccaacaggcccgactccctg
gacccggccctgcgcagagccggccgcttcgacagggagatctgcctgggcatcccggac
gaggcggctcgtctccggatcttgaagacgttgtgccggaagctgaagctgccggaggac
tttgacttccagcagctggctcggctcactccgggctacgtgggcgccgacctgatggcc
ctgtgccgcgaggccgccatgagcgcggtgaaccgggttctgctggacctgagggcccgt
ctgcaggagccggtccggagtaccgacgaggagctggcggcaggcggaacggcaggcgga
gcggcaggcggagcggcaggcggagcggcaggcggagcggcaggcggagcggcaggcgga
gcggcaggcggagcggcaggtggagcggcaggcggagcggcaggcggagcggcaggcgga
gcggcaggcggagcggcaggcggagcggcaggcggagcggcaggcggagcgccggcccag
gctggggaagctcagctgcagcagggggagctgtggcagctgctggctctgctgaaggcc
agcgagacgctgtcggaggagcagctgcagggtctctccatcctcatgtccgacttcaag
gaggctctgtccagcgtgcagccgtcggccaagagggagggcttcgccacggtgcccgac
gtcagctgggacagcgtgggagccctgcacgacatccgggaggagctcaccatggccatt
ctggctccagtccgctccccagagcagttcaaggctctgggactcagcgccccgtcgggg
gtgctgctggccggccctccggggtgtgggaagactctgctggctaaggccgtggccaac
gagtcgggcctgaacttcatctctgtgaagggcccggagctgctcaacatgtacgtaggc
gagagcgagcgggccgtcaggcaggtcttccagagaggacgcaactcggctccgtgtgtc
atcttctttgacgaggtggacgctctgtgtccccgccgctccggacacgagtcaggggcc
agcgtgcgagtggtgaaccagctgctcacggagatggacggcctggaggcgcggcggcag
gtcttcatcatggctgccaccaacagacccgacatcatcgacccggccatcctgaggccc
ggccgtctggataagaccctgtacgtgggcctgccgggcccagaggaccgccacgccatc
ctgctggccatcaccaagggaggatccaaacccccgctggaccaggacgtcagtctggag
cagatcgccttcgacgagcgctgcgactgcttctcaggggctgacctgacggcactagtg
agggaagcgtccgtcaacgctctgaaggcctacaggaagtcccagcactgcggccacgct
ggttcctgcagctgcatatctgacctcagggtgagcaggcagaacttcgaggacgggttc
agggccatccgtccgtctgtgaccaagaaggatcagaagatgtacgagcagctgaaagag
tctctcagcagatga
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