Cololabis saira (Pacific saury): 133463885
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Entry
133463885 CDS
T09849
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133463885 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133463885 (lrit1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
fn3
LRR_14
Ig_2
C2-set_2
LRR_5
LRR_EndoS
DUF6161
Motif
Other DBs
NCBI-GeneID:
133463885
NCBI-ProteinID:
XP_061601627
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All DBs
Position
17:20657182..20662313
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AA seq
651 aa
AA seq
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MLFFLLLGLCVATGELFSKVESCPSQCSCFYHNLSDGSKARSVICNDPEISLVPAGFPVD
TSKLRIEKTSIQQIPSEAFSYLSSLEFLWMSFNTLSALSPDSFQGLFNLEELRLDGNALT
AFPWESLMDMPSLRLLDLHNNQLTSLPAEATTYIKNLTYLDLSSNSLLTLPSEVLSTWLA
AKPTQGPESSKMILGLHDNPWVCDCRLYDLVQFQKSPTLSVAFIDTRLRCSAPESLSGVL
FSDAELRQCQLPRVHTAVARVRSPVGNNVLLRCGTIGIPIPDLTWRRADGRLLNGTVQQE
TSQEGITWSILSVPAVSFRDSGKFICKASNYAGNAEAVISLIVSNSVKPEGNQTTSDKKA
KVKKPNPMGKAAYQEKLVARYLVSTSTPSSLPALDPALAPDLGPDPGLASYSLTDRTTQG
PATSSNADTLLDLEKTNLSNLAANTSSLQQDPDRVVRSVKVVGDTDNRIYLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVTINGLVPKTKYIACVCVKGLIPRKEQCVIFST
DEAASATGTQKMINGIVITVACIIAVPLTIIVCCGALKRRIQKYWGKKSKDIQDSYVTFE
TLSPATKAKGLEGEYLNRLNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttattcttccttctcctggggctctgtgtggccacaggtgaacttttttctaaagtg
gaatcctgcccatcgcagtgcagctgtttttaccacaatttaagtgatggatcaaaggca
aggagcgtgatatgcaatgatcccgagatatccctcgtgcctgccgggttccctgttgat
acatccaagctgcggattgaaaagacctccatccagcagataccaagcgaggccttcagc
tacctctccagtctggaattcctgtggatgtctttcaacacgctgtcggctttgagccca
gacagtttccaaggactgttcaacctggaggagcttcgtctggacgggaatgccctcaca
gcctttccgtgggaatctctcatggacatgcccagcctcagacttctggatttgcacaac
aaccagctaacctcgctgcccgcagaagccaccacttacatcaaaaacctcacctacctg
gacctgtccagcaacagcctgctgactctgccgtcggaggtgctgtccacttggctggct
gcaaaacccacacaggggccggagagctcaaagatgatacttggtctccatgacaaccct
tgggtgtgtgactgtcggctctatgacctggtccagttccagaagtctcccacgctttct
gttgcattcattgacacaagactccgttgttcagccccagagagtctgtcaggggtcttg
ttcagtgatgcagagttgcgccagtgtcaactcccacgcgtccacacagctgtggcacga
gtccggagtccagttggaaacaatgttctgctccgttgtgggaccattggaatccccata
ccagatttgacgtggcgccgggcagatggacggctcctcaatggaacagtccagcaggaa
acatctcaggagggaatcacatggtccatcctgagtgtcccagctgtgtcctttcgcgat
tcagggaaattcatctgcaaggccagtaattatgctggtaatgctgaggctgtcatttct
cttattgtttctaactcagtaaaaccagaagggaaccagaccaccagtgacaaaaaggcc
aaagtcaagaaaccaaacccgatgggcaaagctgcctatcaagagaaactggtagccaga
tatttagtttcaacctctaccccttcatccttgccggccctggatcctgcccttgcacct
gatcttggtcctgatcctggactagctagttacagccttactgacagaaccacccaaggg
cccgcaacttcctccaacgcagatacgctactggatttggagaaaacaaacctaagcaac
ttagcagcgaacacgtcatcactacagcaggacccagacagggttgtccgctcggtgaag
gtagtgggggacacagacaatagaatctatctaaactggagagcccctaaagccaagaac
acaacagcatttagtgttctttatgccgtgtttggagaaagggatatgagaaagataaat
gttggagcagggcagaaccgtgtaaccattaatgggttggtgccaaagaccaagtacatt
gcctgtgtgtgtgtgaaggggctgattcccagaaaagaacagtgtgttatattttccacg
gatgaagcagctagtgctaccggcacccagaagatgattaatgggattgtgatcaccgtg
gcctgtatcatagcagtcccactcactatcatcgtatgctgtggggcgctgaagagacgc
atccagaagtactggggaaagaagtcaaaggatattcaagattcatatgtgacctttgaa
acactgtcgcctgccacaaaggccaaaggtcttgagggcgagtatttaaacagactgaac
ccagaggaatccaacaggctgctgtcagcccgctccagcctggactctgaggccacagct
aagatagagggacagcccaatgagtacttctgctga
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